RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 OR2C1O95371 312 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 PGM3O95394 542 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 CLDN7O95471 211 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 IL1AP01583 271 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 SLC2A4P14672 509 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 ITGAXP20702 1163 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 PSMA4P25789 261 aaKnown RBP3.9□□□□□ -1.79
CLK1-214ENST00000496205 CIITAP33076 1130 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 ACSL1P33121 698 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 COPB2P35606 906 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 RAD52P43351 418 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 CLCNKBP51801 687 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 SLC12A2P55011 1212 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 TMPRSS3P57727 454 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 HSF1Q00613 529 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 CREB5Q02930 508 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 IRF3Q14653 427 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 TAF11Q15544 211 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 INPP5JQ15735 1006 aaPredicted RBP3.9□□□□□ -1.79
CLK1-214ENST00000496205 HSPB2Q16082 182 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 SMTNL2Q2TAL5 461 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 COL28A1Q2UY09 1125 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 EDRF1Q3B7T1 1238 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 SLC9C1Q4G0N8 1177 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 HMBOX1Q6NT76 420 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 TMEM71Q6P5X7 295 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 AAGABQ6PD74 315 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 NCEH1Q6PIU2 408 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 FAM57BQ71RH2 274 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 ENOSF1Q7L5Y1 443 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 RRM2BQ7LG56 351 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 KDELC2Q7Z4H8 507 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 UBE2Q1Q7Z7E8 422 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 KIAA2013Q8IYS2 634 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 SLC25A41Q8N5S1 370 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 KDM1BQ8NB78 822 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 C11orf65Q8NCR3 313 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 C1orf131Q8NDD1 294 aaKnown RBP3.9□□□□□ -1.79
CLK1-214ENST00000496205 RASSF8Q8NHQ8 419 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 PSPC1Q8WXF1 523 aaKnown RBP3.9□□□□□ -1.79
CLK1-214ENST00000496205 SLC25A28Q96A46 364 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 NSUN4Q96CB9 384 aaKnown RBP3.9□□□□□ -1.79
CLK1-214ENST00000496205 EIF2B3Q9NR50 452 aaKnown RBP3.9□□□□□ -1.79
CLK1-214ENST00000496205 ANKEF1Q9NU02 776 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 TMEM45AQ9NWC5 275 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 NCKIPSDQ9NZQ3 722 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 MSRB1Q9NZV6 116 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 AGO2Q9UKV8 859 aaKnown RBP3.9□□□□□ -1.79
CLK1-214ENST00000496205 PCDHGB4Q9UN71 923 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 A4GNTQ9UNA3 340 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 RABGAP1Q9Y3P9 1069 aa3.9□□□□□ -1.79
CLK1-214ENST00000496205 BTBD18B2RXH4 712 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 EBAG9O00559 213 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 KLK8O60259 260 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 PORP16435 677 aaPredicted RBP3.89□□□□□ -1.79
CLK1-214ENST00000496205 SRD5A1P18405 259 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 NFKBIAP25963 317 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 YWHAQP27348 245 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 POU1F1P28069 291 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 TNFSF8P32971 234 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 ARL3P36405 182 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 UBA7P41226 1012 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 PIP4K2AP48426 406 aaPredicted RBP3.89□□□□□ -1.79
CLK1-214ENST00000496205 CENPAP49450 140 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 RARSP54136 660 aaKnown RBP3.89□□□□□ -1.79
CLK1-214ENST00000496205 MC1RQ01726 317 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 MAMLD1Q13495 774 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 STIM1Q13586 685 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 FGFBP1Q14512 234 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 ASIC2Q16515 512 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 ODF3L2Q3SX64 289 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 DUSP28Q4G0W2 176 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 PIK3CD-AS1Q5SR53 167 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 ZNF793Q6ZN11 406 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 QSOX2Q6ZRP7 698 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 FAM83HQ6ZRV2 1179 aaPredicted RBP3.89□□□□□ -1.79
CLK1-214ENST00000496205 BRINP3Q76B58 766 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 GALNT5Q7Z7M9 940 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 TMPRSS12Q86WS5 348 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 FAM9BQ8IZU0 186 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 FRMD1Q8N878 549 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 BCAS4Q8TDM0 211 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 DNASE2BQ8WZ79 361 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 ERP27Q96DN0 273 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 MMABQ96EY8 250 aaPredicted RBP3.89□□□□□ -1.79
CLK1-214ENST00000496205 CLMNQ96JQ2 1002 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 FAM84BQ96KN1 310 aaPredicted RBP3.89□□□□□ -1.79
CLK1-214ENST00000496205 STRA6Q9BX79 667 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 FTOQ9C0B1 505 aaKnown RBP eCLIP3.89□□□□□ -1.79
CLK1-214ENST00000496205 MVB12BQ9H7P6 319 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 PNRC2Q9NPJ4 139 aaKnown RBP3.89□□□□□ -1.79
CLK1-214ENST00000496205 DDX4Q9NQI0 724 aaKnown RBP3.89□□□□□ -1.79
CLK1-214ENST00000496205 PAPOLBQ9NRJ5 636 aaKnown RBP3.89□□□□□ -1.79
CLK1-214ENST00000496205 THSD1Q9NS62 852 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 SLC6A13Q9NSD5 602 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 NSMCE4AQ9NXX6 385 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 PLK2Q9NYY3 685 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 POLG2Q9UHN1 485 aa3.89□□□□□ -1.79
CLK1-214ENST00000496205 IPO11Q9UI26 975 aaKnown RBP3.89□□□□□ -1.79
CLK1-214ENST00000496205 A0A0U1RQF3 1178 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms