RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-218	ENST00000496197	SPOCK2	Q92563	424 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	FEM1C	Q96JP0	617 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	LRFN3	Q9BTN0	628 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	HDAC8	Q9BY41	377 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	DPH5	Q9H2P9	285 aa		13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	AAR2	Q9Y312	384 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-218	ENST00000496197	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	FAM187A	A6NFU0	413 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197		A8MX80	341 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	UPK3BL1	B0FP48	263 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	UPK3BL2	E5RIL1	263 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	DNALI1	O14645	258 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	ALDH1A2	O94788	518 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	IGLV3-19	P01714	112 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	ACADM	P11310	421 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	LHCGR	P22888	699 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	ADCY8	P40145	1251 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	MAGEA6	P43360	314 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	NEK3	P51956	506 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	ADPRH	P54922	357 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	ZBTB16	Q05516	673 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	RALGDS	Q12967	914 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	SRSF5	Q13243	272 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	MSLN	Q13421	630 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	PRPSAP1	Q14558	356 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	MAP7D1	Q3KQU3	841 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	IZUMO3	Q5VZ72	239 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	DUPD1	Q68J44	220 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	BRAT1	Q6PJG6	821 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	TTC7B	Q86TV6	843 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	TSPAN33	Q86UF1	283 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	NAT8L	Q8N9F0	302 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	OR52K1	Q8NGK4	314 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	PPP1R16A	Q96I34	528 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	OMD	Q99983	421 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	TBL1Y	Q9BQ87	522 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	ERP44	Q9BS26	406 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	FSD1L	Q9BXM9	530 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	PCDH12	Q9NPG4	1184 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	GRHL1	Q9NZI5	618 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	MBD1	Q9UIS9	605 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	SNX24	Q9Y343	169 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	PPIL1	Q9Y3C6	166 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	SPO11	Q9Y5K1	396 aa		13.57	□□□□□ -0.24
PTPN7-218	ENST00000496197	TRPM6	Q9BX84	2022 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197		A0A0J9YYE9	177 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	ESYT3	A0FGR9	886 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	EFCAB8	A8MWE9	144 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	ANKRD66	B4E2M5	251 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	AREL1	O15033	823 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	AXIN1	O15169	862 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	PLRG1	O43660	514 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	SUN1	O94901	812 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	HEXIM1	O94992	359 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	NDST3	O95803	873 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	TRBC1	P01850	177 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	BCKDHB	P21953	392 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	HOXA6	P31267	233 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	HNF1B	P35680	557 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	ANGPT1	Q15389	498 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	TTC31	Q49AM3	519 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	FBXL19	Q6PCT2	694 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	C4orf22	Q6V702	233 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	MICALCL	Q6ZW33	695 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	USP30	Q70CQ3	517 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	MAATS1	Q7Z4T9	603 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	HCAR2	Q8TDS4	363 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	GANC	Q8TET4	914 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	IFT43	Q96FT9	208 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	PWWP2A	Q96N64	755 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	EPC1	Q9H2F5	836 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	LRRC40	Q9H9A6	602 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	DYRK4	Q9NR20	520 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	EIF2B3	Q9NR50	452 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	B4GALT6	Q9UBX8	382 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	PHTF1	Q9UMS5	762 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	SCML1	Q9UN30	329 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	FADS3	Q9Y5Q0	445 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	THADA	Q6YHU6	1953 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	ABCA7	Q8IZY2	2146 aa		13.56	□□□□□ -0.24
PTPN7-218	ENST00000496197	C10orf142	B7Z368	130 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197		E7EVH7	732 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	GOLGA8M	H3BSY2	632 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	RIOK3	O14730	519 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	AURKA	O14965	403 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	SEC31A	O94979	1220 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	TPH1	P17752	444 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	TPSB2	P20231	275 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	MMP12	P39900	470 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	GRIA4	P48058	902 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	ITGA8	P53708	1063 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	PPP2CB	P62714	309 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	PPP2CA	P67775	309 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	TPSAB1	Q15661	275 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	CDKN3	Q16667	212 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	CFAP58	Q5T655	872 aa		13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-218	ENST00000496197	AGGF1	Q8N302	714 aa	eCLIP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms