RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SLCO1B7G3V0H7 640 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 J3KR12 359 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 KDELR3O43731 214 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 DNAJC6O75061 913 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 SIN3BO75182 1162 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 STC2O76061 302 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 CNTN5O94779 1100 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 LUC7L3O95232 432 aaKnown RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 NDST3O95803 873 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 TBX18O95935 607 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 PROCP04070 461 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 RBP1P09455 135 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 RPL17P18621 184 aaKnown RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 OGNP20774 298 aaKnown RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 SAT1P21673 171 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 CALB2P22676 271 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 GJA8P48165 433 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 MNAT1P51948 309 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 ABCE1P61221 599 aaKnown RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 MAXP61244 160 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 WDR5P61964 334 aaKnown RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 IRX4P78413 519 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 NSUN2Q08J23 767 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP39-219ENST00000496047 SLC10A7Q0GE19 358 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 OVGP1Q12889 678 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 OLIG2Q13516 323 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 CDH18Q13634 790 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 GRM3Q14832 879 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 PCLAFQ15004 111 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 GALNTL6Q49A17 601 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 ARHGAP15Q53QZ3 475 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 FSCBQ5H9T9 825 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 AARS2Q5JTZ9 985 aaKnown RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 LIPMQ5VYY2 423 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 ALG1LQ6GMV1 187 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 NEPROQ6NW34 567 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 FAM117BQ6P1L5 589 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 AFTPHQ6ULP2 937 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 RSPO2Q6UXX9 243 aaPredicted RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 RANBP10Q6VN20 620 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 TAS1R1Q7RTX1 841 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 ZC3HC1Q86WB0 502 aaKnown RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 TMEM173Q86WV6 379 aaPredicted RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 ARID3BQ8IVW6 561 aaPredicted RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 TCEAL8Q8IYN2 117 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 GPATCH11Q8N954 259 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 C2CD4AQ8NCU7 369 aaPredicted RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 ZSCAN18Q8TBC5 510 aaPredicted RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 BCL7CQ8WUZ0 217 aaPredicted RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 MCUR1Q96AQ8 359 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 ZNF689Q96CS4 500 aaPredicted RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 RMDN1Q96DB5 314 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 THOC1Q96FV9 657 aaKnown RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 ZNF333Q96JL9 665 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 RMDN2Q96LZ7 410 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 FCRL3Q96P31 734 aaPredicted RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 KLHL5Q96PQ7 755 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 UCN2Q96RP3 112 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 TTC1Q99614 292 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 MGME1Q9BQP7 344 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 CLSTN3Q9BQT9 956 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 TRIM56Q9BRZ2 755 aaKnown RBP6.97□□□□□ -1.29
USP39-219ENST00000496047 MECRQ9BV79 373 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 C1QTNF2Q9BXJ5 285 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 CRISPLD1Q9H336 500 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 PRO3102Q9H379 93 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 MFSD1Q9H3U5 465 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 SLC40A1Q9NP59 571 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 KLC4Q9NSK0 619 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 TREX1Q9NSU2 369 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 NDFIP2Q9NV92 336 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 DNAJC28Q9NX36 388 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP39-219ENST00000496047 RAPGEFL1Q9UHV5 662 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 FBXO5Q9UKT4 447 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 TRIM33Q9UPN9 1127 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 DOLKQ9UPQ8 538 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 MAP4K5Q9Y4K4 846 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 PSAT1Q9Y617 370 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 PLXNB3Q9ULL4 1909 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 KIAA1549LQ6ZVL6 1849 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 CEP290O15078 2479 aa6.96□□□□□ -1.29
USP39-219ENST00000496047 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.96□□□□□ -1.3
USP39-219ENST00000496047 CCDC78A2IDD5 438 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 HGSO14964 777 aaPredicted RBP6.96□□□□□ -1.3
USP39-219ENST00000496047 KIAA0355O15063 1070 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 INSIG1O15503 277 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 TRIM13O60858 407 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 SNNO75324 88 aaPredicted RBP6.96□□□□□ -1.3
USP39-219ENST00000496047 RPP40O75818 363 aaKnown RBP6.96□□□□□ -1.3
USP39-219ENST00000496047 KLHL2O95198 593 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 VNN2O95498 520 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 EFEMP2O95967 443 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 C1RP00736 705 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 LMNAP02545 664 aaKnown RBP6.96□□□□□ -1.3
USP39-219ENST00000496047 C2P06681 752 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 CKMP06732 381 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 KITP10721 976 aa6.96□□□□□ -1.3
USP39-219ENST00000496047 ESRRAP11474 423 aaPredicted RBP6.96□□□□□ -1.3
USP39-219ENST00000496047 NFKBIAP25963 317 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms