RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 DNPEPQ9ULA0 475 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 ZKSCAN5Q9Y2L8 839 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 PCDHGC4Q9Y5F7 938 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 APC2O95996 2303 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 ACACAQ13085 2346 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 KALRNO60229 2985 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 TENM4Q6N022 2769 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12□□□□□ -0.49
APTX-233ENST00000496030 SPAARA0A1B0GVQ0 90 aa12□□□□□ -0.49
APTX-233ENST00000496030 CES2O00748 559 aa12□□□□□ -0.49
APTX-233ENST00000496030 AREL1O15033 823 aa12□□□□□ -0.49
APTX-233ENST00000496030 ZNF185O15231 689 aa12□□□□□ -0.49
APTX-233ENST00000496030 MTSS1O43312 755 aa12□□□□□ -0.49
APTX-233ENST00000496030 PLRG1O43660 514 aaKnown RBP12□□□□□ -0.49
APTX-233ENST00000496030 LIASO43766 372 aa12□□□□□ -0.49
APTX-233ENST00000496030 PRLP01236 227 aa12□□□□□ -0.49
APTX-233ENST00000496030 PRLRP16471 622 aa12□□□□□ -0.49
APTX-233ENST00000496030 ITIH2P19823 946 aa12□□□□□ -0.49
APTX-233ENST00000496030 CES1P23141 567 aa12□□□□□ -0.49
APTX-233ENST00000496030 MSNP26038 577 aaKnown RBP12□□□□□ -0.49
APTX-233ENST00000496030 PI4KAP42356 2102 aa12□□□□□ -0.49
APTX-233ENST00000496030 ABL2P42684 1182 aa12□□□□□ -0.49
APTX-233ENST00000496030 MAPK8P45983 427 aa12□□□□□ -0.49
APTX-233ENST00000496030 ADPRHP54922 357 aa12□□□□□ -0.49
APTX-233ENST00000496030 ETF1P62495 437 aaKnown RBP12□□□□□ -0.49
APTX-233ENST00000496030 IRX4P78413 519 aa12□□□□□ -0.49
APTX-233ENST00000496030 SKOR1P84550 965 aa12□□□□□ -0.49
APTX-233ENST00000496030 RAD51Q06609 339 aa12□□□□□ -0.49
APTX-233ENST00000496030 TRAF2Q12933 501 aa12□□□□□ -0.49
APTX-233ENST00000496030 GRM3Q14832 879 aa12□□□□□ -0.49
APTX-233ENST00000496030 ELF2Q15723 593 aa12□□□□□ -0.49
APTX-233ENST00000496030 PMS2CLQ68D20 193 aa12□□□□□ -0.49
APTX-233ENST00000496030 DARS2Q6PI48 645 aaKnown RBP12□□□□□ -0.49
APTX-233ENST00000496030 SLC41A1Q8IVJ1 513 aa12□□□□□ -0.49
APTX-233ENST00000496030 CDKL3Q8IVW4 592 aaPredicted RBP12□□□□□ -0.49
APTX-233ENST00000496030 TMEFF1Q8IYR6 380 aa12□□□□□ -0.49
APTX-233ENST00000496030 BBS5Q8N3I7 341 aa12□□□□□ -0.49
APTX-233ENST00000496030 DEFB119Q8N690 84 aa12□□□□□ -0.49
APTX-233ENST00000496030 PRELID2Q8N945 189 aa12□□□□□ -0.49
APTX-233ENST00000496030 IMP4Q96G21 291 aaKnown RBP12□□□□□ -0.49
APTX-233ENST00000496030 GORASP1Q9BQQ3 440 aa12□□□□□ -0.49
APTX-233ENST00000496030 GPR174Q9BXC1 333 aa12□□□□□ -0.49
APTX-233ENST00000496030 POLR1EQ9GZS1 481 aaKnown RBP12□□□□□ -0.49
APTX-233ENST00000496030 SLC25A51Q9H1U9 297 aa12□□□□□ -0.49
APTX-233ENST00000496030 C6orf106Q9H6K1 298 aaPredicted RBP12□□□□□ -0.49
APTX-233ENST00000496030 ATP13A3Q9H7F0 1226 aa12□□□□□ -0.49
APTX-233ENST00000496030 SGK2Q9HBY8 427 aa12□□□□□ -0.49
APTX-233ENST00000496030 GLOD4Q9HC38 313 aa12□□□□□ -0.49
APTX-233ENST00000496030 SCUBE2Q9NQ36 999 aa12□□□□□ -0.49
APTX-233ENST00000496030 SMARCAL1Q9NZC9 954 aa12□□□□□ -0.49
APTX-233ENST00000496030 SEPT10Q9P0V9 454 aa12□□□□□ -0.49
APTX-233ENST00000496030 NCKAP1Q9Y2A7 1128 aa12□□□□□ -0.49
APTX-233ENST00000496030 ASXL3Q9C0F0 2248 aa12□□□□□ -0.49
APTX-233ENST00000496030 TNRC6BQ9UPQ9 1833 aaKnown RBP12□□□□□ -0.49
APTX-233ENST00000496030 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.99□□□□□ -0.49
APTX-233ENST00000496030 C5orf60A6NFR6 353 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 SLC7A4O43246 635 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 FZD6O60353 706 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 SEMA4FO95754 770 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 PDHA1P08559 390 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 ADRB3P13945 408 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 PTGER3P43115 390 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 GDF10P55107 478 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 BCL2L1Q07817 233 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 ITKQ08881 620 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 SFSWAPQ12872 951 aaKnown RBP11.99□□□□□ -0.49
APTX-233ENST00000496030 CCNG2Q16589 344 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 DRICH1Q6PGQ1 229 aaPredicted RBP11.99□□□□□ -0.49
APTX-233ENST00000496030 SLC36A4Q6YBV0 504 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 CREG2Q8IUH2 290 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.99□□□□□ -0.49
APTX-233ENST00000496030 FAM71DQ8N9W8 422 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 CADM4Q8NFZ8 388 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 ACTRT1Q8TDG2 376 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 GANCQ8TET4 914 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 RTP4Q96DX8 246 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 SPACA7Q96KW9 195 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 VAT1Q99536 393 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 ORAI3Q9BRQ5 295 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 FRMD8P1Q9BZ68 369 aaPredicted RBP11.99□□□□□ -0.49
APTX-233ENST00000496030 BTBD1Q9H0C5 482 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 TRHDEQ9UKU6 1024 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 FADS3Q9Y5Q0 445 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 ADAMTS9Q9P2N4 1935 aa11.99□□□□□ -0.49
APTX-233ENST00000496030 TRPM6Q9BX84 2022 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 METTL12A8MUP2 240 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 KHNYNO15037 678 aaKnown RBP11.98□□□□□ -0.49
APTX-233ENST00000496030 KCNN4O15554 427 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 MAP3K13O43283 966 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 AP1G1O43747 822 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 SOCS5O75159 536 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 GCATO75600 419 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 RHOBTB1O94844 696 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 PGLSO95336 258 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 IGHV4-34P06331 123 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 TCP1P17987 556 aaKnown RBP11.98□□□□□ -0.49
APTX-233ENST00000496030 NFKB1P19838 968 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 SERPINA4P29622 427 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 CD86P42081 329 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 NEK3P51956 506 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms