RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 RHOAP61586 193 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 SRSF6Q13247 344 aaKnown RBP17.7■□□□□ 0.42
TMEM53-209ENST00000495630 GRM3Q14832 879 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 UGP2Q16851 508 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 ZNF354CQ86Y25 554 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 Q8N9G6 341 aaPredicted RBP17.7■□□□□ 0.42
TMEM53-209ENST00000495630 MLKLQ8NB16 471 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 WDR92Q96MX6 357 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 CMKLR1Q99788 373 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 STK33Q9BYT3 514 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 SUV39H2Q9H5I1 410 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 NOL6Q9H6R4 1146 aaKnown RBP17.7■□□□□ 0.42
TMEM53-209ENST00000495630 COQ6Q9Y2Z9 468 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 DAAM1Q9Y4D1 1078 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 FHOD1Q9Y613 1164 aa17.7■□□□□ 0.42
TMEM53-209ENST00000495630 A0A1W2PQC6 194 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 TSPAN11A1L157 253 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 C2CD4BA6NLJ0 364 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 UCHL3P15374 230 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 MMP8P22894 467 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 CD82P27701 267 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 MTM1Q13496 603 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 TBR1Q16650 682 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 MIIPQ5JXC2 388 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 CERCAMQ5T4B2 595 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 ERAP2Q6P179 960 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 ZNF677Q86XU0 584 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 DTX1Q86Y01 620 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 RTL3Q8N8U3 475 aaKnown RBP17.69■□□□□ 0.42
TMEM53-209ENST00000495630 FAM46DQ8NEK8 389 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 GPT2Q8TD30 523 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 EPS8L1Q8TE68 723 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 NTAN1Q96AB6 310 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 ZNF641Q96N77 438 aaPredicted RBP17.69■□□□□ 0.42
TMEM53-209ENST00000495630 TUBGCP2Q9BSJ2 902 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 TRIM4Q9C037 500 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 PCDH12Q9NPG4 1184 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 OR1A2Q9Y585 309 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 PCDHGA4Q9Y5G9 962 aa17.69■□□□□ 0.42
TMEM53-209ENST00000495630 PRAMEF33A0A0G2JMD5 474 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 CFAP69A5D8W1 941 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 INSIG1O15503 277 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 PRAMEF10O60809 474 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 CYP1A1P04798 512 aaPredicted RBP17.68■□□□□ 0.42
TMEM53-209ENST00000495630 FAM87AP0C7U9 286 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 ITIH1P19827 911 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 LIG3P49916 1009 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 HDAC4P56524 1084 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 CYTH1Q15438 398 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 TCEA2Q15560 299 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 TAF8Q7Z7C8 310 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 ZFAND4Q86XD8 727 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 USP7Q93009 1102 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 NCAPGQ9BPX3 1015 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 KLC2Q9H0B6 622 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 LRIT1Q9P2V4 623 aa17.68■□□□□ 0.42
TMEM53-209ENST00000495630 BOD1L1Q8NFC6 3051 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 TNFRSF10CO14798 259 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 NUDT21O43809 227 aaKnown RBP17.67■□□□□ 0.42
TMEM53-209ENST00000495630 HOXC4P09017 264 aaPredicted RBP17.67■□□□□ 0.42
TMEM53-209ENST00000495630 KELP23276 732 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 EPHB2P29323 1055 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 SERINC3Q13530 473 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 ARHGEF7Q14155 803 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 PARP15Q460N3 678 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 C14orf28Q4W4Y0 310 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 TMEM164Q5U3C3 297 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 BRAT1Q6PJG6 821 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 SPRED1Q7Z699 444 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 SLFN11Q7Z7L1 901 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 DNAAF5Q86Y56 855 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 SLITRK4Q8IW52 837 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 CCDC185Q8N715 623 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 NETO2Q8NC67 525 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 OR56A4Q8NGH8 313 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 JOSD2Q8TAC2 188 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 GEMIN8Q9NWZ8 242 aaKnown RBP17.67■□□□□ 0.42
TMEM53-209ENST00000495630 AKAP7Q9P0M2 348 aaPredicted RBP17.67■□□□□ 0.42
TMEM53-209ENST00000495630 LHX3Q9UBR4 397 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 RNF215Q9Y6U7 377 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 CHD5Q8TDI0 1954 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 UNC13CQ8NB66 2214 aa17.67■□□□□ 0.42
TMEM53-209ENST00000495630 WASH4PA8MWX3 477 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.66■□□□□ 0.42
TMEM53-209ENST00000495630 RASA4BC9J798 803 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 F8VZ95 297 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 RASA4O43374 803 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 PIGNO95427 931 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 PCCBP05166 539 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 KRT3P12035 628 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 ETV5P41161 510 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 NFKB2Q00653 900 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 CDR2Q01850 454 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 SRSF1Q07955 248 aaKnown RBP eCLIP17.66■□□□□ 0.42
TMEM53-209ENST00000495630 BECN1Q14457 450 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 HLTFQ14527 1009 aaKnown RBP eCLIP17.66■□□□□ 0.42
TMEM53-209ENST00000495630 CAMK4Q16566 473 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 ZNF574Q6ZN55 896 aaPredicted RBP17.66■□□□□ 0.42
TMEM53-209ENST00000495630 NYAP1Q6ZVC0 841 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 PHLDB2Q86SQ0 1253 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms