RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 SCAMP1O15126 338 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 PAGE1O75459 146 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 DXOO77932 396 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 PAK4O96013 591 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 HNRNPA2B1P22626 353 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 GKP32189 559 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 SSR1P43307 286 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 RWDD2BP57060 319 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 SULT2A1Q06520 285 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 C1orf61Q13536 156 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 SLC12A1Q13621 1099 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 WHAMMP3Q1A5X7 153 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 ACBD5Q5T8D3 534 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 OTUD1Q5VV17 481 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 ABI3BPQ7Z7G0 1075 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 DSG4Q86SJ6 1040 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 PSTKQ8IV42 348 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 RBFAQ8N0V3 343 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 EMC1Q8N766 993 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 ATP11CQ8NB49 1132 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 FAM172AQ8WUF8 416 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 PGAP3Q96FM1 320 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 RBM41Q96IZ5 413 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 MUC3BQ9H195 1237 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 NLGN3Q9NZ94 848 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 VPS51Q9UID3 782 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 GGT7Q9UJ14 662 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 ENTPD2Q9Y5L3 495 aa11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 MUSKO15146 869 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 ZNF821O75541 412 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 GCATO75600 419 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 URI1O94763 535 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 GJB6O95452 261 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 ATP1A1P05023 1023 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 CELA2BP08218 269 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 SLC2A3P11169 496 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 AKT2P31751 481 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 PAFAH1B1P43034 410 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 ZNF135P52742 658 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 PDX1P52945 283 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 ERVPABLB-1P60509 514 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 KCNC4Q03721 635 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 CLN3Q13286 438 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 ZNF177Q13360 481 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 TGIF1Q15583 401 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 ARL13BQ3SXY8 428 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 CCDC14Q49A88 953 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 TMEM259Q4ZIN3 620 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 BOLA3Q53S33 107 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 RABGAP1LQ5R372 815 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 ZFYVE27Q5T4F4 411 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 ARTNQ5T4W7 220 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 CCDC181Q5TID7 509 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 DPY19L3Q6ZPD9 716 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 PRICKLE2Q7Z3G6 844 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 TFAP2DQ7Z6R9 452 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 VSIG1Q86XK7 387 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 MAP7D3Q8IWC1 876 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 KATNAL2Q8IYT4 538 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 MNS1Q8NEH6 495 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 OR7D4Q8NG98 312 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 LMX1AQ8TE12 382 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 TEKT4Q8WW24 435 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 MAIP1Q8WWC4 291 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 NT5C3BQ969T7 300 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 BTBD6Q96KE9 485 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 CFAP57Q96MR6 1250 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 SLC46A1Q96NT5 459 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 NPY6RQ99463 290 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 TLR10Q9BXR5 811 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 MPP6Q9NZW5 540 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 TPX2Q9ULW0 747 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 ITM2BQ9Y287 266 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 PCDHA3Q9Y5H8 950 aa11.91□□□□□ -0.5
CSNK1E-212ENST00000494610 K7ENP7 123 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 M0QYT0 321 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 ALOX15BO15296 676 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 LRCH4O75427 683 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 LEFTY1O75610 366 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 WISP1O95388 367 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 CCR1P32246 355 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 NUDT1P36639 197 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 COPS2P61201 443 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 SKOR1P84550 965 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 ATP11AP98196 1134 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 OGDHQ02218 1023 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 DEUP1Q05D60 604 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 NFATC3Q12968 1075 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 EIF2B5Q13144 721 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 PDE1CQ14123 709 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 CDO1Q16878 200 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 LRRC73Q5JTD7 316 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 BRMS1LQ5PSV4 323 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 INO80CQ6PI98 192 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 ERN2Q76MJ5 926 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 LSMEM2Q8N112 164 aa11.9□□□□□ -0.5
CSNK1E-212ENST00000494610 CENPIQ92674 756 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms