RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 MARC1Q5VT66 337 aa33.44■■■□□ 2.94
CBX4-203ENST00000494546 NCBP2-AS2Q69YL0 99 aa33.44■■■□□ 2.94
CBX4-203ENST00000494546 MARCH9Q86YJ5 346 aa33.44■■■□□ 2.94
CBX4-203ENST00000494546 GALNT15Q8N3T1 639 aa33.44■■■□□ 2.94
CBX4-203ENST00000494546 KDF1Q8NAX2 398 aaPredicted RBP33.44■■■□□ 2.94
CBX4-203ENST00000494546 FRYQ5TBA9 3013 aa33.44■■■□□ 2.94
CBX4-203ENST00000494546 TMEM8BA6NDV4 472 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 H3BM21 787 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 NME1P15531 152 aaKnown RBP33.43■■■□□ 2.94
CBX4-203ENST00000494546 CKMT2P17540 419 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 MAXP61244 160 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 PTK2BQ14289 1009 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 PROX2Q3B8N5 592 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 OR4C6Q8NH72 309 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 ZCCHC14Q8WYQ9 949 aaKnown RBP33.43■■■□□ 2.94
CBX4-203ENST00000494546 NUDCD1Q96RS6 583 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 MGME1Q9BQP7 344 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 KLF15Q9UIH9 416 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 PCDHGC4Q9Y5F7 938 aa33.43■■■□□ 2.94
CBX4-203ENST00000494546 FAM149AA5PLN7 773 aa33.42■■■□□ 2.94
CBX4-203ENST00000494546 MAP3K6O95382 1288 aa33.42■■■□□ 2.94
CBX4-203ENST00000494546 C1SP09871 688 aa33.42■■■□□ 2.94
CBX4-203ENST00000494546 JUNDP17535 347 aa33.42■■■□□ 2.94
CBX4-203ENST00000494546 CR2P20023 1033 aa33.42■■■□□ 2.94
CBX4-203ENST00000494546 YPEL5P62699 121 aa33.42■■■□□ 2.94
CBX4-203ENST00000494546 EIF2B5Q13144 721 aaKnown RBP33.42■■■□□ 2.94
CBX4-203ENST00000494546 PAFAH1B3Q15102 231 aaKnown RBP33.42■■■□□ 2.94
CBX4-203ENST00000494546 LRRC49Q8IUZ0 686 aa33.42■■■□□ 2.94
CBX4-203ENST00000494546 PDCD6IPQ8WUM4 868 aaKnown RBP33.42■■■□□ 2.94
CBX4-203ENST00000494546 NOD2Q9HC29 1040 aa33.42■■■□□ 2.94
CBX4-203ENST00000494546 EPG5Q9HCE0 2579 aa33.42■■■□□ 2.94
CBX4-203ENST00000494546 NEMP2A6NFY4 417 aa33.41■■■□□ 2.94
CBX4-203ENST00000494546 ALPPL2P10696 532 aa33.41■■■□□ 2.94
CBX4-203ENST00000494546 SMAD1Q15797 465 aaKnown RBP33.41■■■□□ 2.94
CBX4-203ENST00000494546 WSCD2Q2TBF2 565 aa33.41■■■□□ 2.94
CBX4-203ENST00000494546 RHOT2Q8IXI1 618 aa33.41■■■□□ 2.94
CBX4-203ENST00000494546 ZNF548Q8NEK5 533 aaPredicted RBP33.41■■■□□ 2.94
CBX4-203ENST00000494546 ZMIZ1Q9ULJ6 1067 aa33.41■■■□□ 2.94
CBX4-203ENST00000494546 PTPRBP23467 1997 aa33.41■■■□□ 2.94
CBX4-203ENST00000494546 TDRD6O60522 2096 aaKnown RBP33.4■■■□□ 2.94
CBX4-203ENST00000494546 ANKRD36A6QL64 1941 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 A8MX80 341 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 NEBLO76041 1014 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 GARSP41250 739 aaKnown RBP33.4■■■□□ 2.94
CBX4-203ENST00000494546 ARHGAP25P42331 645 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 DAB2P98082 770 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 GALNT2Q10471 571 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 RALGDSQ12967 914 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 RFFLQ8WZ73 363 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 RAPGEF5Q92565 580 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 NT5MQ9NPB1 228 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 NLGN3Q9NZ94 848 aa33.4■■■□□ 2.94
CBX4-203ENST00000494546 AKAP13Q12802 2813 aa33.39■■■□□ 2.94
CBX4-203ENST00000494546 SCAMP1O15126 338 aa33.39■■■□□ 2.94
CBX4-203ENST00000494546 ELFN1P0C7U0 828 aa33.39■■■□□ 2.94
CBX4-203ENST00000494546 GIMD1P0DJR0 217 aa33.39■■■□□ 2.94
CBX4-203ENST00000494546 CDK4P11802 303 aa33.39■■■□□ 2.94
CBX4-203ENST00000494546 LMX1AQ8TE12 382 aa33.39■■■□□ 2.94
CBX4-203ENST00000494546 FAF2Q96CS3 445 aa33.39■■■□□ 2.94
CBX4-203ENST00000494546 TOR1BO14657 336 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 HTRA2O43464 458 aaPredicted RBP33.38■■■□□ 2.93
CBX4-203ENST00000494546 SOCS5O75159 536 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 MTA2O94776 668 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 PCCBP05166 539 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 KDELR1P24390 212 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 CLDN6P56747 220 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 ITKQ08881 620 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 LIPIQ6XZB0 460 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 MACC1Q6ZN28 852 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 DPPA4Q7L190 304 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 RBFAQ8N0V3 343 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 PQLC3Q8N755 202 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 TC2NQ8N9U0 490 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 ARID1BQ8NFD5 2236 aaPredicted RBP33.38■■■□□ 2.93
CBX4-203ENST00000494546 PLXNB3Q9ULL4 1909 aa33.38■■■□□ 2.93
CBX4-203ENST00000494546 LRRD1A4D1F6 860 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 CFAP69A5D8W1 941 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 K7ESM1 405 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 CPP00450 1065 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 ACP1P24666 158 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 TRAF2Q12933 501 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 ILKQ13418 452 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 INPP5AQ14642 412 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 AGERQ15109 404 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 IFI16Q16666 785 aaKnown RBP33.37■■■□□ 2.93
CBX4-203ENST00000494546 RALGPS1Q5JS13 557 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 TIGD7Q6NT04 549 aaPredicted RBP33.37■■■□□ 2.93
CBX4-203ENST00000494546 TMPRSS12Q86WS5 348 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 PHACTR4Q8IZ21 702 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 TEX26Q8N6G2 289 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 BTN2A2Q8WVV5 523 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 DUSP23Q9BVJ7 150 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 TCEAL2Q9H3H9 227 aaPredicted RBP33.37■■■□□ 2.93
CBX4-203ENST00000494546 B4GALT6Q9UBX8 382 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 APOBEC3BQ9UH17 382 aaKnown RBP33.37■■■□□ 2.93
CBX4-203ENST00000494546 SHROOM3Q8TF72 1996 aa33.37■■■□□ 2.93
CBX4-203ENST00000494546 A0A1W2PQ67 120 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 AQP9O43315 295 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 KRT37O76014 449 aa33.36■■■□□ 2.93
CBX4-203ENST00000494546 RECQL5O94762 991 aaPredicted RBP33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms