RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 FAM46DQ8NEK8 389 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 TTC9Q92623 222 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 WBP1Q96G27 269 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 PDXPQ96GD0 296 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 KLC2Q9H0B6 622 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 CLMPQ9H6B4 373 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 CATSPERBQ9H7T0 1116 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 PCDH12Q9NPG4 1184 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 SEPT10Q9P0V9 454 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 RABGEF1Q9UJ41 708 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 NOCTQ9UK39 431 aaKnown RBP9.72□□□□□ -0.85
UBR4-216ENST00000494503 ATXN7L1Q9ULK2 861 aaPredicted RBP9.72□□□□□ -0.85
UBR4-216ENST00000494503 DAAM1Q9Y4D1 1078 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 LOXL2Q9Y4K0 774 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 GTF3C3Q9Y5Q9 886 aa9.72□□□□□ -0.85
UBR4-216ENST00000494503 ARHGEF17Q96PE2 2063 aaPredicted RBP9.71□□□□□ -0.85
UBR4-216ENST00000494503 GOLGA6CA6NDK9 693 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 GOLGA6BA6NDN3 693 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 TMEM110-MUSTN1A8MSY1 372 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 A8MX80 341 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 TMX2-CTNND1H3BSU7 103 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 CACNB4O00305 520 aaPredicted RBP9.71□□□□□ -0.86
UBR4-216ENST00000494503 TOR1BO14657 336 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 DAPK3O43293 454 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 CALB1P05937 261 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 GOLGA6DP0CG33 693 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 ITIH1P19827 911 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 EEF1GP26641 437 aaKnown RBP9.71□□□□□ -0.86
UBR4-216ENST00000494503 ERCC5P28715 1186 aaPredicted RBP9.71□□□□□ -0.86
UBR4-216ENST00000494503 RFC1P35251 1148 aaPredicted RBP9.71□□□□□ -0.86
UBR4-216ENST00000494503 UGT1A5P35504 534 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 SOX5P35711 763 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 STAT1P42224 750 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 PTPN9P43378 593 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 LIG3P49916 1009 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 TPI1P60174 286 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 FMO1Q01740 532 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 NRG1Q02297 640 aaPredicted RBP9.71□□□□□ -0.86
UBR4-216ENST00000494503 KCNC4Q03721 635 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 EIF3IQ13347 325 aaKnown RBP9.71□□□□□ -0.86
UBR4-216ENST00000494503 WSCD2Q2TBF2 565 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 PARP15Q460N3 678 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 TCP11X2Q5H9J9 407 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 MANEAQ5SRI9 462 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 DENND2CQ68D51 928 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 DCUN1D2Q6PH85 259 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 IGF2-ASQ6U949 168 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 TRIM72Q6ZMU5 477 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 NYAP1Q6ZVC0 841 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 ARCQ7LC44 396 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 BNIPLQ7Z465 357 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 CLEC14AQ86T13 490 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 VASH2Q86V25 355 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 ZSCAN1Q8NBB4 408 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 CASKIN2Q8WXE0 1202 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 EXTL1Q92935 676 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 LIN37Q96GY3 246 aaPredicted RBP9.71□□□□□ -0.86
UBR4-216ENST00000494503 CELF6Q96J87 481 aaKnown RBP9.71□□□□□ -0.86
UBR4-216ENST00000494503 TBATAQ96M53 351 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 WDR92Q96MX6 357 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 TMEM74Q96NL1 305 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 MCEEQ96PE7 176 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 APOOQ9BUR5 198 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 NAA15Q9BXJ9 866 aaKnown RBP9.71□□□□□ -0.86
UBR4-216ENST00000494503 NUP62CLQ9H1M0 184 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 LRRN3Q9H3W5 708 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 DPEP2Q9H4A9 486 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 CLSTN2Q9H4D0 955 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 GOLGA6AQ9NYA3 693 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 PCDHB11Q9Y5F2 797 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 NAV2Q8IVL1 2488 aa9.71□□□□□ -0.86
UBR4-216ENST00000494503 HECTD1Q9ULT8 2610 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 DFFAO00273 331 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 TEX33O43247 280 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 CCP110O43303 1012 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 PALMO75781 387 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 CYP1A1P04798 512 aaPredicted RBP9.7□□□□□ -0.86
UBR4-216ENST00000494503 ELFN1P0C7U0 828 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 SERPINA4P29622 427 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 MLLT3P42568 568 aaPredicted RBP9.7□□□□□ -0.86
UBR4-216ENST00000494503 PEX5P50542 639 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 NFKB2Q00653 900 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 SRSF6Q13247 344 aaKnown RBP9.7□□□□□ -0.86
UBR4-216ENST00000494503 SERINC3Q13530 473 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 ACOX1Q15067 660 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 UGP2Q16851 508 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 AMZ1Q400G9 498 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 TMEM52BQ4KMG9 183 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 INO80DQ53TQ3 878 aaPredicted RBP9.7□□□□□ -0.86
UBR4-216ENST00000494503 ARTNQ5T4W7 220 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 SMYD5Q6GMV2 418 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 DPY19L2P1Q6NXN4 242 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 WDR59Q6PJI9 974 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 CAMK1DQ8IU85 385 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 OR6C4Q8NGE1 309 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 PDCD6IPQ8WUM4 868 aaKnown RBP9.7□□□□□ -0.86
UBR4-216ENST00000494503 JPH3Q8WXH2 748 aaPredicted RBP9.7□□□□□ -0.86
UBR4-216ENST00000494503 NTAN1Q96AB6 310 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 SGF29Q96ES7 293 aa9.7□□□□□ -0.86
UBR4-216ENST00000494503 CINPQ9BW66 212 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms