RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RPL17P18621 184 aaKnown RBP13.88□□□□□ -0.19
VCP-207ENST00000493886 TACR2P21452 398 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
VCP-207ENST00000493886 APLP1P51693 650 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 IL10RBQ08334 325 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 SERINC3Q13530 473 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 HEATR9A2RTY3 570 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 MAGEC1O60732 1142 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 ATP5BP06576 529 aaKnown RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 ACVRL1P37023 503 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 SLC1A2P43004 574 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 MAPKAPK2P49137 400 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 ALDH7A1P49419 539 aaKnown RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 HARS2P49590 506 aaKnown RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 SERPINH1P50454 418 aaKnown RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 ATN1P54259 1190 aaPredicted RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 YBEYP58557 167 aaPredicted RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 TNK2Q07912 1038 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 IHHQ14623 411 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 TCHHL1Q5QJ38 904 aaPredicted RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 SLC8B1Q6J4K2 584 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 ISLR2Q6UXK2 745 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 DEFB128Q7Z7B8 93 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 SLC41A1Q8IVJ1 513 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 C1QTNF1Q9BXJ1 281 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 MTRRQ9UBK8 725 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 ANGPTL2Q9UKU9 493 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 TTC24A2A3L6 582 aaPredicted RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 OR1D2P34982 312 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 AVPR1AP37288 418 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 ETFBP38117 255 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 USP41Q3LFD5 358 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 ZNF470Q6ECI4 717 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 LGI2Q8N0V4 545 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 PGBD5Q8N414 524 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 C2CD4AQ8NCU7 369 aaPredicted RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 SLC26A7Q8TE54 656 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 VCXQ9H320 206 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 TASP1Q9H6P5 420 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 DNMT3LQ9UJW3 386 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 APOBEC2Q9Y235 224 aaKnown RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 FAM95CA0A1B0GW59 222 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 E9PBE3 544 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 F5H5T6 163 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 NDUFB5O43674 189 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 KLHL41O60662 606 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 SLC35E2BP0CK96 405 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 CD1EP15812 388 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 ATP5C1P36542 298 aaKnown RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 POLD2P49005 469 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 ACTR3P61158 418 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 SLC12A1Q13621 1099 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 TRMT5Q32P41 509 aaKnown RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 DNAL1Q4LDG9 190 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 FOXB2Q5VYV0 432 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 NET1Q7Z628 596 aaPredicted RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 ARRDC2Q8TBH0 407 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 TSNARE1Q96NA8 513 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 RANBP9Q96S59 729 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 CDK5RAP1Q96SZ6 601 aaKnown RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 CORO1BQ9BR76 489 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 PAK6Q9NQU5 681 aaPredicted RBP13.87□□□□□ -0.19
VCP-207ENST00000493886 MID2Q9UJV3 735 aa13.87□□□□□ -0.19
VCP-207ENST00000493886 A0A088AWK7 358 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 TRIM13O60858 407 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 EFEMP2O95967 443 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 APOA4P06727 396 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 TUFMP49411 452 aaKnown RBP13.86□□□□□ -0.19
VCP-207ENST00000493886 AP2B1P63010 937 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 TUBB3Q13509 450 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 LBRQ14739 615 aaKnown RBP13.86□□□□□ -0.19
VCP-207ENST00000493886 OR52E8Q6IFG1 317 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 NEPROQ6NW34 567 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■■■□□ 16.5
VCP-207ENST00000493886 MFSD6LQ8IWD5 586 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 PHTF2Q8N3S3 785 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 SREK1Q8WXA9 508 aaKnown RBP13.86□□□□□ -0.19
VCP-207ENST00000493886 ZNF512Q96ME7 567 aaPredicted RBP13.86□□□□□ -0.19
VCP-207ENST00000493886 ACE2Q9BYF1 805 aaPredicted RBP13.86□□□□□ -0.19
VCP-207ENST00000493886 STN1Q9H668 368 aaKnown RBP13.86□□□□□ -0.19
VCP-207ENST00000493886 UXTQ9UBK9 157 aaPredicted RBP13.86□□□□□ -0.19
VCP-207ENST00000493886 FBXO5Q9UKT4 447 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 PCDHB12Q9Y5F1 795 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 TANC1Q9C0D5 1861 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.86□□□□□ -0.19
VCP-207ENST00000493886 LSM1O15116 133 aaKnown RBP13.86□□□□□ -0.19
VCP-207ENST00000493886 ACSL4O60488 711 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 PRAMEF11O60813 436 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 CPOXP36551 454 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 NUMBP49757 651 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 INHBCP55103 352 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 RAB10P61026 200 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 MSLNQ13421 630 aaPredicted RBP13.86□□□□□ -0.19
VCP-207ENST00000493886 CMPK2Q5EBM0 449 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 TSTD2Q5T7W7 516 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 LPCAT4Q643R3 524 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 NAPRTQ6XQN6 538 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 NANOGNBQ7Z5D8 188 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 CFAP52Q8N1V2 620 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 MIPOL1Q8TD10 442 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms