RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 TM6SF1Q9BZW5 370 aa3.91□□□□□ -1.78
CD46-217ENST00000493796 ENTPD7Q9NQZ7 604 aa3.91□□□□□ -1.78
CD46-217ENST00000493796 SETBP1Q9Y6X0 1596 aa3.9□□□□□ -1.78
CD46-217ENST00000493796 PIK3C2GO75747 1445 aa3.9□□□□□ -1.78
CD46-217ENST00000493796 FAM90A7PA6NKC0 464 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 FAM90A22PA8MWA6 464 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 FAM90A12PA8MX19 464 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 FAM90A23PA8MXZ1 464 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 KDM4EB2RXH2 506 aaPredicted RBP3.9□□□□□ -1.79
CD46-217ENST00000493796 PRSS44E7EML9 344 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 IFRD1O00458 451 aaPredicted RBP3.9□□□□□ -1.79
CD46-217ENST00000493796 CHL1O00533 1208 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 PEX12O00623 359 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 KLK10O43240 276 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 SLC25A17O43808 307 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 CHRM4P08173 479 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 FCGR1AP12314 374 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 PDLIM4P50479 330 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 SEC61A1P61619 476 aaKnown RBP3.9□□□□□ -1.79
CD46-217ENST00000493796 ADORA2A-AS1P86434 159 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 FAM27E3Q08E93 113 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 TRAF3Q13114 568 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 CTTNQ14247 550 aaKnown RBP3.9□□□□□ -1.79
CD46-217ENST00000493796 LPIN1Q14693 890 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 PLCB4Q15147 1175 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 FJX1Q86VR8 437 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 DCP1BQ8IZD4 617 aaKnown RBP3.9□□□□□ -1.79
CD46-217ENST00000493796 SMRP1Q8NCR6 262 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 DNAAF1Q8NEP3 725 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 GPT2Q8TD30 523 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 FAM216AQ8WUB2 273 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 TMEM170AQ8WVE7 144 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 RAB40AQ8WXH6 277 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 PYM1Q9BRP8 204 aaKnown RBP3.9□□□□□ -1.79
CD46-217ENST00000493796 LMAN2LQ9H0V9 348 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 CDT1Q9H211 546 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 AGO1Q9UL18 857 aaKnown RBP3.9□□□□□ -1.79
CD46-217ENST00000493796 GPR52Q9Y2T5 361 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 NLRP1Q9C000 1473 aa3.9□□□□□ -1.79
CD46-217ENST00000493796 MARF1Q9Y4F3 1742 aaKnown RBP3.9□□□□□ -1.79
CD46-217ENST00000493796 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.89□□□□□ -1.79
CD46-217ENST00000493796 SH2D7A6NKC9 451 aaPredicted RBP3.89□□□□□ -1.79
CD46-217ENST00000493796 TSPAN3O60637 253 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 KCNJ13O60928 360 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 ZNF12P17014 697 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 ITGB8P26012 769 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 KIF5AQ12840 1032 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 CAPSQ13938 189 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 PLEKHO1Q53GL0 409 aaPredicted RBP3.89□□□□□ -1.79
CD46-217ENST00000493796 PRSS45Q7RTY3 260 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 CNOT9Q92600 299 aaKnown RBP3.89□□□□□ -1.79
CD46-217ENST00000493796 RNF183Q96D59 192 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 REEP2Q9BRK0 252 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.89□□□□□ -1.79
CD46-217ENST00000493796 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 C6orf106Q9H6K1 298 aaPredicted RBP3.89□□□□□ -1.79
CD46-217ENST00000493796 CLK4Q9HAZ1 481 aaKnown RBP3.89□□□□□ -1.79
CD46-217ENST00000493796 IFT80Q9P2H3 777 aaPredicted RBP3.89□□□□□ -1.79
CD46-217ENST00000493796 SLC45A1Q9Y2W3 748 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 KANK1Q14678 1352 aa3.89□□□□□ -1.79
CD46-217ENST00000493796 NPHP4O75161 1426 aaPredicted RBP3.88□□□□□ -1.79
CD46-217ENST00000493796 MYOM1P52179 1685 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 MYOM2P54296 1465 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 SCAF11Q99590 1463 aaKnown RBP3.88□□□□□ -1.79
CD46-217ENST00000493796 KIAA1210Q9ULL0 1709 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 A0A1B0GVM2 712 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 PER2O15055 1255 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 PPP1R3DO95685 299 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 MYF6P23409 242 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 TTKP33981 857 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 MXI1P50539 228 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 ART1P52961 327 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 BNC1Q01954 994 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 ST3GAL1Q11201 340 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 TBL3Q12788 808 aaKnown RBP3.88□□□□□ -1.79
CD46-217ENST00000493796 PPFIA1Q13136 1202 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 SLC12A1Q13621 1099 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 HLFQ16534 295 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 DCAF6Q58WW2 860 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 EFHC1Q5JVL4 640 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 MAP3K21Q5TCX8 1036 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 IL20RBQ6UXL0 311 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 CREB3L2Q70SY1 520 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 MON1AQ86VX9 555 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 CHD1LQ86WJ1 897 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 DENND6AQ8IWF6 608 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 LMO3Q8TAP4 145 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 GDPD5Q8WTR4 605 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 TMED6Q8WW62 240 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 STAMQ92783 540 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 TESK2Q96S53 571 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 YME1L1Q96TA2 773 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 CD180Q99467 661 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 SLC25A33Q9BSK2 321 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 TAOK3Q9H2K8 898 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 MROH8Q9H579 483 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 EPHX3Q9H6B9 360 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 PPCSQ9HAB8 311 aa3.88□□□□□ -1.79
CD46-217ENST00000493796 SPATS2LQ9NUQ6 558 aaKnown RBP3.88□□□□□ -1.79
CD46-217ENST00000493796 LRRC7Q96NW7 1537 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms