RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 KCTD16Q68DU8 428 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 STRADAQ7RTN6 431 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 CCNJLQ8IV13 435 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 JOSD2Q8TAC2 188 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 GPT2Q8TD30 523 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 RBM15Q96T37 977 aaKnown RBP eCLIP21.65■■□□□ 1.063e-10■□□□□ 10.7
PFDN4-205ENST00000493356 FLNCQ14315 2725 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 C2CD4BA6NLJ0 364 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 FAM87AP0C7U9 286 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 PRKCSHP14314 528 aaPredicted RBP21.64■■□□□ 1.05
PFDN4-205ENST00000493356 MMP8P22894 467 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 PTPN9P43378 593 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 HDAC4P56524 1084 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 ZFP36L1Q07352 338 aaKnown RBP21.64■■□□□ 1.05
PFDN4-205ENST00000493356 TPD52L1Q16890 204 aaPredicted RBP21.64■■□□□ 1.05
PFDN4-205ENST00000493356 PHLDB2Q86SQ0 1253 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 Q8N9G6 341 aaPredicted RBP21.64■■□□□ 1.05
PFDN4-205ENST00000493356 PDXPQ96GD0 296 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 EXOC2Q96KP1 924 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 WDR92Q96MX6 357 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 TUBGCP2Q9BSJ2 902 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 PCDH12Q9NPG4 1184 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 APPL1Q9UKG1 709 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 PCDHGA4Q9Y5G9 962 aa21.64■■□□□ 1.05
PFDN4-205ENST00000493356 PRAMEF33A0A0G2JMD5 474 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 TSPAN11A1L157 253 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 F8VZ95 297 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 PRAMEF10O60809 474 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 PIGNO95427 931 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 UCHL3P15374 230 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 GLB1P16278 677 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 ETV5P41161 510 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 AGERQ15109 404 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 CAMK4Q16566 473 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 UGP2Q16851 508 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 MANEAQ5SRI9 462 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 CERCAMQ5T4B2 595 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 ATG14Q6ZNE5 492 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 VASH2Q86V25 355 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 FAM114A1Q8IWE2 563 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 RTL3Q8N8U3 475 aaKnown RBP21.63■■□□□ 1.05
PFDN4-205ENST00000493356 ATL2Q8NHH9 583 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 HCAR2Q8TDS4 363 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 SLC20A1Q8WUM9 679 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 CENPIQ92674 756 aaPredicted RBP21.63■■□□□ 1.05
PFDN4-205ENST00000493356 NTAN1Q96AB6 310 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 TMEM159Q96B96 161 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 HMCESQ96FZ2 354 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 SEPT10Q9P0V9 454 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 LHX3Q9UBR4 397 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 DGKBQ9Y6T7 804 aa21.63■■□□□ 1.05
PFDN4-205ENST00000493356 AGRPO00253 132 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 TNFP01375 233 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 LIG3P49916 1009 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 MTM1Q13496 603 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 OGFOD3Q6PK18 319 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 SPRED1Q7Z699 444 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 ZFAND4Q86XD8 727 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 SFTPA2Q8IWL1 248 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 MLKLQ8NB16 471 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 FAM172AQ8WUF8 416 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 NCAPGQ9BPX3 1015 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 STK33Q9BYT3 514 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 SUV39H2Q9H5I1 410 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 FOXJ2Q9P0K8 574 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 NOCTQ9UK39 431 aaKnown RBP21.62■■□□□ 1.05
PFDN4-205ENST00000493356 DAAM1Q9Y4D1 1078 aa21.62■■□□□ 1.05
PFDN4-205ENST00000493356 RASA4BC9J798 803 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 RASA4O43374 803 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 SUV39H1O43463 412 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 CYP1A1P04798 512 aaPredicted RBP21.61■■□□□ 1.05
PFDN4-205ENST00000493356 PCCBP05166 539 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 SFTPCP11686 197 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 PNLIPP16233 465 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 WT1P19544 449 aaPredicted RBP21.61■■□□□ 1.05
PFDN4-205ENST00000493356 EPHB2P29323 1055 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 YBEYP58557 167 aaPredicted RBP21.61■■□□□ 1.05
PFDN4-205ENST00000493356 CYTH1Q15438 398 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 ZNF677Q86XU0 584 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 PYROXD2Q8N2H3 581 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 FAM46DQ8NEK8 389 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 OR1E3Q8WZA6 343 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 USP7Q93009 1102 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 CMKLR1Q99788 373 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 SEMA3CQ99985 751 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 C11orf70Q9BRQ4 267 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 RNF215Q9Y6U7 377 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 BSNQ9UPA5 3926 aa21.61■■□□□ 1.05
PFDN4-205ENST00000493356 ARHGEF17Q96PE2 2063 aaPredicted RBP21.6■■□□□ 1.05
PFDN4-205ENST00000493356 C9orf172C9J069 976 aa21.6■■□□□ 1.05
PFDN4-205ENST00000493356 MMP12P39900 470 aa21.6■■□□□ 1.05
PFDN4-205ENST00000493356 SERINC3Q13530 473 aa21.6■■□□□ 1.05
PFDN4-205ENST00000493356 TBR1Q16650 682 aa21.6■■□□□ 1.05
PFDN4-205ENST00000493356 HSP90AA4PQ58FG1 418 aa21.6■■□□□ 1.05
PFDN4-205ENST00000493356 ERAP2Q6P179 960 aa21.6■■□□□ 1.05
PFDN4-205ENST00000493356 TMPRSS9Q7Z410 1059 aa21.6■■□□□ 1.05
PFDN4-205ENST00000493356 TAF8Q7Z7C8 310 aa21.6■■□□□ 1.05
PFDN4-205ENST00000493356 DTX1Q86Y01 620 aa21.6■■□□□ 1.05
PFDN4-205ENST00000493356 DNAAF5Q86Y56 855 aa21.6■■□□□ 1.05
PFDN4-205ENST00000493356 SLITRK4Q8IW52 837 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms