RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PYCARDQ9ULZ3 195 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 CHKBQ9Y259 395 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 SLCO1B1Q9Y6L6 691 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 TCRBV7S2A1N4TA0A589 114 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 A8MX80 341 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 KCNN4O15554 427 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 SPINT1O43278 529 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 CEP104O60308 925 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 TM7SF2O76062 418 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 STK10O94804 968 aaKnown RBP14.06□□□□□ -0.16
CCM2-217ENST00000492883 SYPP08247 313 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 AKT2P31751 481 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 EPHB1P54762 984 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 SKOR1P84550 965 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 LMNB2Q03252 620 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 TMEM259Q4ZIN3 620 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 ZNF567Q8N184 647 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 SLC35F6Q8N357 371 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 RBM15Q96T37 977 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCM2-217ENST00000492883 MYOCQ99972 504 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 GTPBP2Q9BX10 602 aaKnown RBP14.06□□□□□ -0.16
CCM2-217ENST00000492883 CAPN10Q9HC96 672 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 TRHDEQ9UKU6 1024 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 WDFY4Q6ZS81 3184 aa14.06□□□□□ -0.16
CCM2-217ENST00000492883 A0A1B0GVT2 93 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 LNP1A1A4G5 178 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 USP27XA6NNY8 438 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 ARHGAP33O14559 1287 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 WNT9AO14904 365 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 LZTS3O60299 673 aaPredicted RBP14.05□□□□□ -0.16
CCM2-217ENST00000492883 ZNF189O75820 626 aaPredicted RBP14.05□□□□□ -0.16
CCM2-217ENST00000492883 MMP2P08253 660 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 PDHA1P08559 390 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 CYP2A6P11509 494 aaPredicted RBP14.05□□□□□ -0.16
CCM2-217ENST00000492883 CTPS1P17812 591 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 ENGP17813 658 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 HNRNPA2B1P22626 353 aaKnown RBP14.05□□□□□ -0.16
CCM2-217ENST00000492883 CD38P28907 300 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 CXCR5P32302 372 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 GRIA4P48058 902 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 LIG3P49916 1009 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 C21orf59P57076 290 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 IHHQ14623 411 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 KDELC2Q7Z4H8 507 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 PIH1D2Q8WWB5 315 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 IMP4Q96G21 291 aaKnown RBP14.05□□□□□ -0.16
CCM2-217ENST00000492883 C1QTNF2Q9BXJ5 285 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 PCDH9Q9HC56 1237 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 FZD3Q9NPG1 666 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 R3HDM2Q9Y2K5 976 aaKnown RBP14.05□□□□□ -0.16
CCM2-217ENST00000492883 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCM2-217ENST00000492883 CACNA1HO95180 2353 aa14.05□□□□□ -0.16
CCM2-217ENST00000492883 NYNRINQ9P2P1 1898 aaKnown RBP14.04□□□□□ -0.16
CCM2-217ENST00000492883 CHD5Q8TDI0 1954 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 FANCMQ8IYD8 2048 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.04□□□□□ -0.16
CCM2-217ENST00000492883 FZD6O60353 706 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 GDF9O60383 454 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 NFKB1P19838 968 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 CD68P34810 354 aaPredicted RBP14.04□□□□□ -0.16
CCM2-217ENST00000492883 MMP12P39900 470 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 TNNT3P45378 269 aaPredicted RBP14.04□□□□□ -0.16
CCM2-217ENST00000492883 ARHGAP8P85298 464 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 FGL2Q14314 439 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 PCSK7Q16549 785 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 LONRF2Q1L5Z9 754 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 ITPRIPL1Q6GPH6 555 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 CCDC70Q6NSX1 233 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 LAYNQ6UX15 382 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 USP45Q70EL2 814 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 MFSD2AQ8NA29 543 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 LPCAT1Q8NF37 534 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 SPATA22Q8NHS9 363 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 MAIP1Q8WWC4 291 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 ASB12Q8WXK4 309 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 RMDN1Q96DB5 314 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 IFT43Q96FT9 208 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 SCRN2Q96FV2 425 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 FCRL5Q96RD9 977 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 EDEM2Q9BV94 578 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 C1QTNF7Q9BXJ2 289 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 TDRD1Q9BXT4 1180 aaKnown RBP14.04□□□□□ -0.16
CCM2-217ENST00000492883 ADGRE3Q9BY15 652 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 FRMD8P1Q9BZ68 369 aaPredicted RBP14.04□□□□□ -0.16
CCM2-217ENST00000492883 ZDHHC5Q9C0B5 715 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 RXFP3Q9NSD7 469 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 UBP1Q9NZI7 540 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 B4GALT6Q9UBX8 382 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 RSPH14Q9UHP6 348 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 DNPEPQ9ULA0 475 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 CA5BQ9Y2D0 317 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 ANKRD6Q9Y2G4 727 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 COQ6Q9Y2Z9 468 aa14.04□□□□□ -0.16
CCM2-217ENST00000492883 CFAP69A5D8W1 941 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 GOLGA8CPA6NN73 597 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 F5H423 210 aaPredicted RBP14.03□□□□□ -0.16
CCM2-217ENST00000492883 TLR4O00206 839 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 FPGTO14772 594 aa14.03□□□□□ -0.16
CCM2-217ENST00000492883 VILLO15195 856 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms