RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 YY2O15391 372 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 INSIG1O15503 277 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 TLX3O43711 291 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 PIGNO95427 931 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 TNFP01375 233 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 HOXC4P09017 264 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 C6P13671 934 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 TSHRP16473 764 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 RBMS1P29558 406 aaKnown RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 ARL4AP40617 200 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 MLLT3P42568 568 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 HK3P52790 923 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 UCNP55089 124 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 PCBP4P57723 403 aaKnown RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 AP1S1P61966 158 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 MTM1Q13496 603 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 PIGHQ14442 188 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 INPP5AQ14642 412 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 NFATC4Q14934 902 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 NR1I3Q14994 352 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 ISXQ2M1V0 245 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 WSCD2Q2TBF2 565 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 SOWAHCQ53LP3 525 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 PPP6R3Q5H9R7 873 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 BROXQ5VW32 411 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 ENPP7Q6UWV6 458 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 RBM44Q6ZP01 1051 aaKnown RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 ZNF571Q7Z3V5 609 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 CAMK1DQ8IU85 385 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 NSMCE1Q8WV22 266 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 SYN2Q92777 582 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 CCDC97Q96F63 343 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 PSKH2Q96QS6 385 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 APOOQ9BUR5 198 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 SNRNP25Q9BV90 132 aaKnown RBP12.55□□□□□ -0.4
COL6A1-205ENST00000492851 ISCUQ9H1K1 167 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 THSD1Q9NS62 852 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 TMEM63CQ9P1W3 806 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 PADI4Q9UM07 663 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 U3KQA8 63 aa12.55□□□□□ -0.4
COL6A1-205ENST00000492851 TP53BP1Q12888 1972 aaPredicted RBP12.54□□□□□ -0.4
COL6A1-205ENST00000492851 CACNB4O00305 520 aaPredicted RBP12.54□□□□□ -0.4
COL6A1-205ENST00000492851 BUB1BO60566 1050 aaPredicted RBP12.54□□□□□ -0.4
COL6A1-205ENST00000492851 GCATO75600 419 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 ITIH2P19823 946 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 MMP12P39900 470 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 SCNN1BP51168 640 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 GABREP78334 506 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 COL9A2Q14055 689 aaPredicted RBP12.54□□□□□ -0.4
COL6A1-205ENST00000492851 IRF4Q15306 451 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 RALGPS1Q5JS13 557 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 LRRC73Q5JTD7 316 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 TPRG1LQ5T0D9 272 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 GUSBP11Q6P575 273 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 LRRC49Q8IUZ0 686 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 ARFGAP1Q8N6T3 406 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 ARL10Q8N8L6 244 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 TSEN2Q8NCE0 465 aaKnown RBP12.54□□□□□ -0.4
COL6A1-205ENST00000492851 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 ZNF653Q96CK0 615 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 ECHDC3Q96DC8 303 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 WDR92Q96MX6 357 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 KCTD15Q96SI1 283 aaPredicted RBP12.54□□□□□ -0.4
COL6A1-205ENST00000492851 LGMNQ99538 433 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 LRRC61Q9BV99 259 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 DPH1Q9BZG8 443 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 PRORYQ9H606 182 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 GPATCH2LQ9NWQ4 482 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 CWC15Q9P013 229 aaKnown RBP12.54□□□□□ -0.4
COL6A1-205ENST00000492851 PCDHB1Q9Y5F3 818 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 PCDHGA8Q9Y5G5 932 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 DGKBQ9Y6T7 804 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 NBEAQ8NFP9 2946 aa12.54□□□□□ -0.4
COL6A1-205ENST00000492851 TEX51A0A1B0GUA7 166 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 A0A1W2PQJ5 194 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 DDX3XO00571 662 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL6A1-205ENST00000492851 TNFRSF10CO14798 259 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 MUSKO15146 869 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 SOCS5O75159 536 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 LRCH4O75427 683 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 MPOP05164 745 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 ELFN1P0C7U0 828 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 MYF5P13349 255 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 KRT10P13645 584 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 HOXB3P14651 431 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-205ENST00000492851 TGM2P21980 687 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 ITPKBP27987 946 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 SERPINB6P35237 376 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 SRP54P61011 504 aaKnown RBP12.53□□□□□ -0.4
COL6A1-205ENST00000492851 C1orf61Q13536 156 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 LBRQ14739 615 aaKnown RBP12.53□□□□□ -0.4
COL6A1-205ENST00000492851 DPYSL2Q16555 572 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 CA9Q16790 459 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
COL6A1-205ENST00000492851 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 GPR155Q7Z3F1 870 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 HID1Q8IV36 788 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 ARHGAP12Q8IWW6 846 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 RBFAQ8N0V3 343 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 NDUFAF2Q8N183 169 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms