RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	NEK5	Q6P3R8	708 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	TRIM69	Q86WT6	500 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	SPATA22	Q8NHS9	363 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	CCDC110	Q8TBZ0	833 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	COG1	Q8WTW3	980 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	ECHDC3	Q96DC8	303 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	IFT43	Q96FT9	208 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	IMP4	Q96G21	291 aa	Known RBP	13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	NAP1L3	Q99457	506 aa	Predicted RBP	13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	SMOC1	Q9H4F8	434 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	PCDH9	Q9HC56	1237 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	KCND1	Q9NSA2	647 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	TMEM74B	Q9NUR3	256 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	PILRB	Q9UKJ0	227 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	SNX12	Q9UMY4	172 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	PCDHGA5	Q9Y5G8	931 aa		13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234	PTPRZ1	P23471	2315 aa	Predicted RBP	13.24	□□□□□ -0.29
AGAP3-223	ENST00000492234		A0A1W2PPC4	97 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	CFAP69	A5D8W1	941 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	RIOK3	O14730	519 aa	Known RBP	13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	AREL1	O15033	823 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	ZNF185	O15231	689 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	BCAT2	O15382	392 aa	Predicted RBP	13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	IFNB1	P01574	187 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	CFI	P05156	583 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	PRLR	P16471	622 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	TCP1	P17987	556 aa	Known RBP	13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	CD27	P26842	260 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	STIP1	P31948	543 aa	Known RBP	13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	PRPSAP1	Q14558	356 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	IHH	Q14623	411 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	CCNG2	Q16589	344 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	DUOXA1	Q1HG43	343 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	SETMAR	Q53H47	684 aa	Predicted RBP	13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	KIAA1161	Q6NSJ0	714 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	CCDC70	Q6NSX1	233 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	ARHGEF18	Q6ZSZ5	1173 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	RASGEF1C	Q8N431	466 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	ZCCHC9	Q8N567	271 aa	Known RBP	13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	LPCAT1	Q8NF37	534 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	CEP76	Q8TAP6	659 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	SLC35B2	Q8TB61	432 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	DNASE2B	Q8WZ79	361 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	RMDN1	Q96DB5	314 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	SERAC1	Q96JX3	654 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	AP1M1	Q9BXS5	423 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	TDRD1	Q9BXT4	1180 aa	Known RBP	13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	SLC17A9	Q9BYT1	436 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	AASDHPPT	Q9NRN7	309 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	HOMER3	Q9NSC5	361 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	SUSD2	Q9UGT4	822 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	FAM153A	Q9UHL3	310 aa		13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	TPX2	Q9ULW0	747 aa	Known RBP	13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	ZFR2	Q9UPR6	939 aa	Known RBP	13.23	□□□□□ -0.29
AGAP3-223	ENST00000492234	RIF1	Q5UIP0	2472 aa	Known RBP	13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	KNL1	Q8NG31	2342 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234		A0A1B0GTW7	788 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	C5orf60	A6NFR6	353 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	GOLGA8CP	A6NN73	597 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	PGRMC1	O00264	195 aa	Known RBP	13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	KHNYN	O15037	678 aa	Known RBP	13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	LZTS3	O60299	673 aa	Predicted RBP	13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	PAK4	O96013	591 aa	Predicted RBP	13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	CYP2A6	P11509	494 aa	Predicted RBP	13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	CASQ1	P31415	396 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	ACTN2	P35609	894 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	PLA2G5	P39877	138 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	LIG3	P49916	1009 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	SIX1	Q15475	284 aa	Predicted RBP	13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	ZNF284	Q2VY69	593 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	TMEM52B	Q4KMG9	183 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	DENND2C	Q68D51	928 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	USP45	Q70EL2	814 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	GSTA5	Q7RTV2	222 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	RABEPK	Q7Z6M1	372 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	ALYREF	Q86V81	257 aa	Known RBP	13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	TAB3	Q8N5C8	712 aa	Predicted RBP	13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	PIH1D2	Q8WWB5	315 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	CAPZA3	Q96KX2	299 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	SPATA13	Q96N96	652 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	FCRL5	Q96RD9	977 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	MYOC	Q99972	504 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	ADGRE3	Q9BY15	652 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	EBF2	Q9HAK2	575 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	VPS45	Q9NRW7	570 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	SMARCAL1	Q9NZC9	954 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	B4GALT6	Q9UBX8	382 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	ZKSCAN5	Q9Y2L8	839 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	COQ6	Q9Y2Z9	468 aa		13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	EP300	Q09472	2414 aa	Predicted RBP	13.22	□□□□□ -0.29
AGAP3-223	ENST00000492234	PRR5-ARHGAP8	B1AHC4	643 aa		13.21	□□□□□ -0.29
AGAP3-223	ENST00000492234	PATE3	B3GLJ2	98 aa		13.21	□□□□□ -0.29
AGAP3-223	ENST00000492234	CES2	O00748	559 aa		13.21	□□□□□ -0.29
AGAP3-223	ENST00000492234	SPINT1	O43278	529 aa		13.21	□□□□□ -0.29
AGAP3-223	ENST00000492234	LAT	O43561	262 aa		13.21	□□□□□ -0.29
AGAP3-223	ENST00000492234	FZD6	O60353	706 aa		13.21	□□□□□ -0.29
AGAP3-223	ENST00000492234	OPHN1	O60890	802 aa		13.21	□□□□□ -0.29
AGAP3-223	ENST00000492234	GCAT	O75600	419 aa		13.21	□□□□□ -0.29
AGAP3-223	ENST00000492234	ANXA9	O76027	345 aa		13.21	□□□□□ -0.29
AGAP3-223	ENST00000492234	TM7SF2	O76062	418 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms