RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 TCEAL1Q15170 157 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 DPYSL2Q16555 572 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 ODF2Q5BJF6 829 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 PTAR1Q7Z6K3 402 aaPredicted RBP12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 PROSER1Q86XN7 944 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 CPNE8Q86YQ8 564 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 PSTKQ8IV42 348 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 NIPA2Q8N8Q9 360 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 TSEN2Q8NCE0 465 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 MDM1Q8TC05 714 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 MBNL1Q9NR56 388 aaKnown RBP12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 U3KQA8 63 aa12.82□□□□□ -0.36
SEC61A1-206ENST00000491668 A0A0U1RQJ8 604 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 TRABD2BA6NFA1 517 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 NEMP1O14524 444 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 RFPL3O75679 317 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 PEX11BO96011 259 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 RARAP10276 462 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 MYF5P13349 255 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 TNNT1P13805 278 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 NME1P15531 152 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 CKMT2P17540 419 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 IGFALSP35858 605 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 SLC1A1P43005 524 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 SEMG2Q02383 582 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 SLC25A11Q02978 314 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 EIF2B5Q13144 721 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 SGCGQ13326 291 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 SMTNL2Q2TAL5 461 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 NYAP1Q6ZVC0 841 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 POLNQ7Z5Q5 900 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 CAMK1DQ8IU85 385 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 SYCE1Q8N0S2 351 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 GALNT15Q8N3T1 639 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 RNF10Q8N5U6 811 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 TP53I13Q8NBR0 393 aaPredicted RBP12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 OR4C6Q8NH72 309 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 TPCN2Q8NHX9 752 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 KIAA1524Q8TCG1 905 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 IFT43Q96FT9 208 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 ALS2CR12Q96Q35 445 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 WRAP53Q9BUR4 548 aaKnown RBP12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 SUV39H2Q9H5I1 410 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 ZWILCHQ9H900 591 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 PYCARDQ9ULZ3 195 aa12.81□□□□□ -0.36
SEC61A1-206ENST00000491668 GOLGA6L9A6NEM1 432 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 ARHGAP42A6NI28 874 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 FPGTO14772 594 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 FFAR2O15552 330 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 NEBLO76041 1014 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 CSF2P04141 144 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 PRKCGP05129 697 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 C1SP09871 688 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 AMPD1P23109 780 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 IL4RP24394 825 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 ACP1P24666 158 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 MAN1A1P33908 653 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 RABIFP47224 123 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 CSNK1DP48730 415 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 SLC10A7Q0GE19 358 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 PDE1CQ14123 709 aaPredicted RBP12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 UGP2Q16851 508 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 TMEM52BQ4KMG9 183 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 BOLA3Q53S33 107 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 C11orf63Q6NUN7 778 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 SRLQ86TD4 932 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 ZSCAN30Q86W11 494 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 TMPRSS12Q86WS5 348 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 DCP2Q8IU60 420 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 DENND6BQ8NEG7 585 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 ZNF548Q8NEK5 533 aaPredicted RBP12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 FAM174AQ8TBP5 190 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 HSPH1Q92598 858 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 CSPG4P5Q96PW8 444 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 TCEAL2Q9H3H9 227 aaPredicted RBP12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 PCDH12Q9NPG4 1184 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 DNAJC28Q9NX36 388 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 IPO11Q9UI26 975 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 SALL4Q9UJQ4 1053 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 COQ6Q9Y2Z9 468 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 MYLKQ15746 1914 aa12.8□□□□□ -0.36
SEC61A1-206ENST00000491668 ASXL3Q9C0F0 2248 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 TTC24A2A3L6 582 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 K7ESM1 405 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 DFFAO00273 331 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 SCAMP1O15126 338 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 DAPK3O43293 454 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 PALMO75781 387 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 KRT7P08729 469 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 CD48P09326 243 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 COMTP21964 271 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 MMP12P39900 470 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 ARSEP51690 589 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 RAD51Q06609 339 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 IL10RBQ08334 325 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 RALGDSQ12967 914 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 WSCD2Q2TBF2 565 aa12.79□□□□□ -0.36
SEC61A1-206ENST00000491668 HS1BP3Q53T59 392 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms