RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ABCG1P45844 678 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 ZNF165P49910 485 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 SCNN1BP51168 640 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 YBEYP58557 167 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-211ENST00000491581 HNRNPKP61978 463 aaKnown RBP eCLIP8.97□□□□□ -0.97
HDAC3-211ENST00000491581 DPYSQ14117 519 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 NR1I3Q14994 352 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 PARP15Q460N3 678 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 TMEM52BQ4KMG9 183 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 ERMARDQ5T6L9 678 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 TMPRSS9Q7Z410 1059 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 TSPAN33Q86UF1 283 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 SPNS2Q8IVW8 549 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 SPACA3Q8IXA5 215 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 ANKRD20A12PQ8NF67 263 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 FNIP1Q8TF40 1166 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 PRR11Q96HE9 360 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-211ENST00000491581 FCRL3Q96P31 734 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-211ENST00000491581 CCDC3Q9BQI4 270 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 APOOQ9BUR5 198 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 OSBPL1AQ9BXW6 950 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 NRSN2Q9GZP1 204 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 THAP2Q9H0W7 228 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 CATSPERBQ9H7T0 1116 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 CBX8Q9HC52 389 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 FGF22Q9HCT0 170 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 PARVAQ9NVD7 372 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 ATXN7L1Q9ULK2 861 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-211ENST00000491581 TPX2Q9ULW0 747 aaKnown RBP8.97□□□□□ -0.97
HDAC3-211ENST00000491581 PLEKHM1Q9Y4G2 1056 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 ST14Q9Y5Y6 855 aa8.97□□□□□ -0.97
HDAC3-211ENST00000491581 URB1O60287 2271 aaKnown RBP8.97□□□□□ -0.97
HDAC3-211ENST00000491581 A0A087X0T9 212 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 A0A1W2PQM1 296 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 TSPAN11A1L157 253 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 ANKRD62A6NC57 917 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 DAPK3O43293 454 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 LZTS3O60299 673 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 RECQL5O94762 991 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 ALPIP09923 528 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 FAM228BP0C875 321 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 RARAP10276 462 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 LHCGRP22888 699 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 XPAP23025 273 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 POLD2P49005 469 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 GEMIN4P57678 1058 aaKnown RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 CXADRP78310 365 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 CCL7P80098 99 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 TLE3Q04726 772 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 KLHL30Q0D2K2 578 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 CCDC15Q0P6D6 951 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 TRAF2Q12933 501 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 LRRC14Q15048 493 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 ISXQ2M1V0 245 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 TBC1D25Q3MII6 688 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 INO80DQ53TQ3 878 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 ACBD5Q5T8D3 534 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 SMYD5Q6GMV2 418 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 ZCCHC8Q6NZY4 707 aaKnown RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 LIPIQ6XZB0 460 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 MACC1Q6ZN28 852 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 B4GALNT4Q76KP1 1039 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 SDR16C5Q8N3Y7 309 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 Q8N9G6 341 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 PDCD6IPQ8WUM4 868 aaKnown RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 PATE1Q8WXA2 126 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 RAB7BQ96AH8 199 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 CCDC74AQ96AQ1 378 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 RNF31Q96EP0 1072 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 IL12RB2Q99665 862 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 CINPQ9BW66 212 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 BOCQ9BWV1 1114 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 PACSIN1Q9BY11 444 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 CPEB1Q9BZB8 566 aaKnown RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 TMEM168Q9H0V1 697 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 ABCG4Q9H172 646 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 PRORYQ9H606 182 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 SP110Q9HB58 689 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 ASCL3Q9NQ33 180 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 WDR70Q9NW82 654 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 AIPL1Q9NZN9 384 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 CD84Q9UIB8 345 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 ATP8A1Q9Y2Q0 1164 aa8.96□□□□□ -0.98
HDAC3-211ENST00000491581 PCYT1BQ9Y5K3 369 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-211ENST00000491581 CACNA1GO43497 2377 aa8.95□□□□□ -0.98
HDAC3-211ENST00000491581 SMG1Q96Q15 3661 aaKnown RBP8.95□□□□□ -0.98
HDAC3-211ENST00000491581 EME2A4GXA9 379 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-211ENST00000491581 ZSCAN5CA6NGD5 496 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-211ENST00000491581 H3BM21 787 aa8.95□□□□□ -0.98
HDAC3-211ENST00000491581 TRAFD1O14545 582 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-211ENST00000491581 FGF10O15520 208 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-211ENST00000491581 PRPSAP2O60256 369 aa8.95□□□□□ -0.98
HDAC3-211ENST00000491581 RASGRP1O95267 797 aa8.95□□□□□ -0.98
HDAC3-211ENST00000491581 MBD3O95983 291 aa8.95□□□□□ -0.98
HDAC3-211ENST00000491581 SERPINC1P01008 464 aa8.95□□□□□ -0.98
HDAC3-211ENST00000491581 PDHA1P08559 390 aa8.95□□□□□ -0.98
HDAC3-211ENST00000491581 ALPPL2P10696 532 aa8.95□□□□□ -0.98
HDAC3-211ENST00000491581 IL4RP24394 825 aa8.95□□□□□ -0.98
HDAC3-211ENST00000491581 PBX1P40424 430 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms