RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SERPINA4P29622 427 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 HNRNPH3P31942 346 aaKnown RBP18.13■□□□□ 0.49
HMGN1-219ENST00000491183 MMP12P39900 470 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 SCNN1BP51168 640 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 BCL2L1Q07817 233 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 RALGDSQ12967 914 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 C1orf61Q13536 156 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 LRRC14Q15048 493 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 AGERQ15109 404 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 CFAP58Q5T655 872 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 TMCO4Q5TGY1 634 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 ERAP2Q6P179 960 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 TMCO3Q6UWJ1 677 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 CPNE8Q86YQ8 564 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 PHACTR4Q8IZ21 702 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 PGBD5Q8N414 524 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 BTN2A2Q8WVV5 523 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 ZNF599Q96NL3 588 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 SEPT3Q9UH03 358 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 CLCA2Q9UQC9 943 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 APC2O95996 2303 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 TOR1BO14657 336 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 CR2P20023 1033 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 PTMSP20962 102 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 MMRN1Q13201 1228 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 INPP5AQ14642 412 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 DEFB133Q30KQ1 61 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 ZCCHC8Q6NZY4 707 aaKnown RBP18.12■□□□□ 0.49
HMGN1-219ENST00000491183 C19orf48Q6RUI8 117 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 MACC1Q6ZN28 852 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 NYAP1Q6ZVC0 841 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 DCBLD1Q8N8Z6 715 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 FAM71BQ8TC56 605 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 CLPBQ9H078 707 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 SPASTQ9UBP0 616 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 APOBEC3BQ9UH17 382 aaKnown RBP18.12■□□□□ 0.49
HMGN1-219ENST00000491183 SALL4Q9UJQ4 1053 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 ACACAQ13085 2346 aa18.12■□□□□ 0.49
HMGN1-219ENST00000491183 SHROOM3Q8TF72 1996 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 CFAP69A5D8W1 941 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 MYO1FO00160 1098 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 TPP1O14773 563 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 LZTS3O60299 673 aaPredicted RBP18.11■□□□□ 0.49
HMGN1-219ENST00000491183 OPA1O60313 960 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 MT-CO3P00414 261 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 CD48P09326 243 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 GM2AP17900 193 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 PEX5P50542 639 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 RENBPP51606 427 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 ARSEP51690 589 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 RTP5Q14D33 572 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 ATP13A4Q4VNC1 1196 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 PRRT3Q5FWE3 981 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 FAXCQ5TGI0 409 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 LIPIQ6XZB0 460 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 APOOQ9BUR5 198 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 LRRC61Q9BV99 259 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 NRSN2Q9GZP1 204 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 USP29Q9HBJ7 922 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 LHX6Q9UPM6 363 aa18.11■□□□□ 0.49
HMGN1-219ENST00000491183 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.11■□□□□ 0.49
HMGN1-219ENST00000491183 URB1O60287 2271 aaKnown RBP18.11■□□□□ 0.49
HMGN1-219ENST00000491183 ANKRD11Q6UB99 2663 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-219ENST00000491183 ASXL3Q9C0F0 2248 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 GP1BAP07359 652 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 DUSP3P51452 185 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-219ENST00000491183 ADKP55263 362 aaKnown RBP18.1■□□□□ 0.49
HMGN1-219ENST00000491183 CDH6P55285 790 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 AP1S1P61966 158 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 POLR2LP62875 67 aaKnown RBP18.1■□□□□ 0.49
HMGN1-219ENST00000491183 PPARDQ03181 441 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 CDCP2Q5VXM1 449 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 PLA2G15Q8NCC3 412 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 ZNF564Q8TBZ8 553 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-219ENST00000491183 TSACCQ96A04 125 aaPredicted RBP18.1■□□□□ 0.49
HMGN1-219ENST00000491183 NXPE2Q96DL1 559 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 TBATAQ96M53 351 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 IL12RB2Q99665 862 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 PACSIN1Q9BY11 444 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 OR1A2Q9Y585 309 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 PCDHGC4Q9Y5F7 938 aa18.1■□□□□ 0.49
HMGN1-219ENST00000491183 TMEM110-MUSTN1A8MSY1 372 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 A8MX80 341 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 LMO7DNF2Z398 122 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 YY2O15391 372 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 HTRA2O43464 458 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-219ENST00000491183 RECQL5O94762 991 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-219ENST00000491183 PCCBP05166 539 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 CELA2BP08218 269 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-219ENST00000491183 TSHRP16473 764 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 SSR1P43307 286 aaKnown RBP18.09■□□□□ 0.49
HMGN1-219ENST00000491183 KRT81Q14533 505 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 ZNF235Q14590 738 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 CDKN3Q16667 212 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 ALG11Q2TAA5 492 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 ASTE1Q2TB18 679 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-219ENST00000491183 COL28A1Q2UY09 1125 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 SKOR2Q2VWA4 1001 aaPredicted RBP18.09■□□□□ 0.49
HMGN1-219ENST00000491183 KCTD16Q68DU8 428 aa18.09■□□□□ 0.49
HMGN1-219ENST00000491183 GUSBP11Q6P575 273 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms