RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	MPHOSPH8	Q99549	860 aa		4.29	□□□□□ -1.72
PHC3-212	ENST00000490723	GAREM1	Q9H706	876 aa		4.29	□□□□□ -1.72
PHC3-212	ENST00000490723	DDX31	Q9H8H2	851 aa	Known RBP	4.29	□□□□□ -1.72
PHC3-212	ENST00000490723	SMYD2	Q9NRG4	433 aa		4.29	□□□□□ -1.72
PHC3-212	ENST00000490723	SLC9A2	Q9UBY0	812 aa		4.29	□□□□□ -1.72
PHC3-212	ENST00000490723	ICAM5	Q9UMF0	924 aa		4.29	□□□□□ -1.72
PHC3-212	ENST00000490723	SAA2-SAA4	A0A096LPE2	208 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	SLC16A5	O15375	505 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	BCAT2	O15382	392 aa	Predicted RBP	4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	NDUFB4	O95168	129 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	IGHV4-30-4	P0DP06	118 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	RPP30	P78346	268 aa	Known RBP	4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	DLG1	Q12959	904 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	GRIK3	Q13003	919 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	ZRSR2	Q15696	482 aa	Known RBP	4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	CALCRL	Q16602	461 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	FAM69B	Q5VUD6	431 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	TMEM81	Q6P7N7	255 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	TMTC1	Q8IUR5	882 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	C11orf65	Q8NCR3	313 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	MYRIP	Q8NFW9	859 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	SNAPC3	Q92966	411 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	ZBTB10	Q96DT7	871 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	ZNF570	Q96NI8	536 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	SLITRK1	Q96PX8	696 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	MMTAG2	Q9BU76	263 aa	Known RBP	4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	ZNF556	Q9HAH1	456 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	NOX4	Q9NPH5	578 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	BEX4	Q9NWD9	120 aa	Predicted RBP	4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	GGA3	Q9NZ52	723 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	CDC14A	Q9UNH5	594 aa		4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.28	□□□□□ -1.72
PHC3-212	ENST00000490723	TEX13C	A0A0J9YWL9	993 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	TNPO2	O14787	897 aa	Known RBP	4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	CLGN	O14967	610 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	KLK8	O60259	260 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	LDB3	O75112	727 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	ZNF432	O94892	652 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	SNRNP70	P08621	437 aa	Known RBP	4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	ETFA	P13804	333 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	ITGAX	P20702	1163 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	EFNA5	P52803	228 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	TLE2	Q04725	743 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	TRPC3	Q13507	836 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	NEDD9	Q14511	834 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	PPP2R5B	Q15173	497 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	MMEL1	Q495T6	779 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	SETMAR	Q53H47	684 aa	Predicted RBP	4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	B3GNT6	Q6ZMB0	384 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	TDRP	Q86YL5	185 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	CPXCR1	Q8N123	301 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	ZCCHC9	Q8N567	271 aa	Known RBP	4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	CREB3L4	Q8TEY5	395 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	HVCN1	Q96D96	273 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	C20orf141	Q9NUB4	165 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	HCN3	Q9P1Z3	774 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	SLCO3A1	Q9UIG8	710 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	FAM96B	Q9Y3D0	163 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	NFE2L3	Q9Y4A8	694 aa		4.27	□□□□□ -1.73
PHC3-212	ENST00000490723	RRN3P2	A6NIE6	340 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	NPIPB11	E5RHQ5	1161 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	KDM4B	O94953	1096 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	CAMTA2	O94983	1202 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	CLDN14	O95500	239 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	UFM1	P61960	85 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	GALNT2	Q10471	571 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	GPR68	Q15743	365 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	EFNB3	Q15768	340 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	ZNF718	Q3SXZ3	478 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	FAM76B	Q5HYJ3	339 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	CPLX2	Q6PUV4	134 aa	Known RBP	4.26	□□□□□ -1.73
PHC3-212	ENST00000490723		Q6ZTC4	211 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	RRM2B	Q7LG56	351 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	DHX40	Q8IX18	779 aa	Known RBP	4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	SPATA20	Q8TB22	786 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	NEK9	Q8TD19	979 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	DNASE2B	Q8WZ79	361 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	FBXL8	Q96CD0	374 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	KIF1BP	Q96EK5	621 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	BICD1	Q96G01	975 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	APOPT1	Q96IL0	206 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	C3orf30	Q96M34	536 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	HSPB7	Q9UBY9	170 aa		4.26	□□□□□ -1.73
PHC3-212	ENST00000490723	CPED1	A4D0V7	1026 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	MAGEA13P	A6NCF6	341 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	GAGE10	A6NGK3	116 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	IFNL4	K9M1U5	179 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	WNT9B	O14905	357 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	BUB3	O43684	328 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	NDUFS7	O75251	213 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	DDN	O94850	711 aa	Predicted RBP	4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	PYGL	P06737	847 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	HEXA	P06865	529 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	GPT	P24298	496 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	CHAT	P28329	748 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	HNRNPH1	P31943	449 aa	Known RBP	4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	STX2	P32856	288 aa		4.25	□□□□□ -1.73
PHC3-212	ENST00000490723	CAMK1	Q14012	370 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms