RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PMS2P54278 862 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 ARF5P84085 180 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 NR1D2Q14995 579 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 CLPPQ16740 277 aaPredicted RBP13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 SETD3Q86TU7 594 aaPredicted RBP13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 TP53INP2Q8IXH6 220 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 LINC00301Q8NCQ3 95 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 RNF31Q96EP0 1072 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 POM121Q96HA1 1249 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 C5orf34Q96MH7 638 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 TEFMQ96QE5 360 aaKnown RBP13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 FGF22Q9HCT0 170 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 APMAPQ9HDC9 416 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 SPATS2LQ9NUQ6 558 aaKnown RBP13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 MPP6Q9NZW5 540 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 LUZP4Q9P127 313 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 MAP10Q9P2G4 905 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 POLHQ9Y253 713 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 PCDHB4Q9Y5E5 795 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 PCDHB3Q9Y5E6 796 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 PCNX1Q96RV3 2341 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 TMEM202A6NGA9 273 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 E5RJQ4 531 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 CD160O95971 181 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 TIMP2P16035 220 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 MCCD1P59942 119 aaPredicted RBP13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 CDK17Q00537 523 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 NME3Q13232 169 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 ADAM9Q13443 819 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 NFIL3Q16649 462 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 RETSATQ6NUM9 610 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 C17orf82Q86X59 251 aaPredicted RBP13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 ZNF683Q8IZ20 524 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 DEFB106AQ8N104 65 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 TTC13Q8NBP0 860 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 ATL2Q8NHH9 583 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 TRIM55Q9BYV6 548 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 SLC5A6Q9Y289 635 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 TMEM184BQ9Y519 407 aaPredicted RBP13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 RPS6KL1Q9Y6S9 549 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 AKAP9Q99996 3911 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 MTORP42345 2549 aa13.79□□□□□ -0.2
EXOSC3-207ENST00000490516 CDC14CA4D256 554 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 A8MU76 341 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 DLGAP3O95886 979 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 PCCBP05166 539 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 OR1E1P30953 314 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 ACADSBP45954 432 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 MC2RQ01718 297 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 SLC20A2Q08357 652 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 RABEP1Q15276 862 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 STILQ15468 1287 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 DENND1BQ6P3S1 775 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 CEACAM20Q6UY09 585 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 PLA2G15Q8NCC3 412 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 OR56A4Q8NGH8 313 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 KIAA1524Q8TCG1 905 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 PATE1Q8WXA2 126 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 FUBP1Q96AE4 644 aaKnown RBP13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 SLC29A3Q9BZD2 475 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 TRIT1Q9H3H1 467 aaKnown RBP13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 THAP9Q9H5L6 903 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 ATP13A1Q9HD20 1204 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 ANLNQ9NQW6 1124 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 RCOR3Q9P2K3 495 aaPredicted RBP13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 NAV3Q8IVL0 2385 aa13.78□□□□□ -0.2
EXOSC3-207ENST00000490516 IGHV1OR21-1A0A087WYE8 117 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 I6L893 689 aaPredicted RBP13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 ZW10O43264 779 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 STX10O60499 249 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 CUTAO60888 179 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 SVILO95425 2214 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 ECEL1O95672 775 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 FGF1P05230 155 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 BMP6P22004 513 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 TBXAS1P24557 533 aaPredicted RBP13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 DLSTP36957 453 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 SNAP47Q5SQN1 464 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 ANKRD40Q6AI12 368 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 MCEMP1Q8IX19 187 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 ZDHHC1Q8WTX9 485 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 KAT5Q92993 513 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 MED15Q96RN5 788 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 DIDO1Q9BTC0 2240 aaKnown RBP13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 SLC4A5Q9BY07 1137 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 MOSPD1Q9UJG1 213 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 COQ4Q9Y3A0 265 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 FBN3Q75N90 2809 aa13.77□□□□□ -0.21
EXOSC3-207ENST00000490516 DRGXA6NNA5 263 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 PPM1DO15297 605 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 PPP6R2O75170 966 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 KATNA1O75449 491 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 GRAP2O75791 330 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 RPL13P26373 211 aaKnown RBP13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 GPR3P46089 330 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 PGDP52209 483 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 NR6A1Q15406 480 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 TMEM52BQ4KMG9 183 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms