RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 SEPT3Q9UH03 358 aa10.44□□□□□ -0.74
RBM39-236ENST00000490484 LRRK1Q38SD2 2015 aa10.44□□□□□ -0.74
RBM39-236ENST00000490484 LY6G6EA0A0G2JKS1 128 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 TTC24A2A3L6 582 aaPredicted RBP10.43□□□□□ -0.74
RBM39-236ENST00000490484 MYO1FO00160 1098 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 RIOK3O14730 519 aaKnown RBP10.43□□□□□ -0.74
RBM39-236ENST00000490484 AQP9O43315 295 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 LZTS3O60299 673 aaPredicted RBP10.43□□□□□ -0.74
RBM39-236ENST00000490484 PCCBP05166 539 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 CD48P09326 243 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 CKMT1AP12532 417 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 SERPINB6P35237 376 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 EIF4A3P38919 411 aaKnown RBP10.43□□□□□ -0.74
RBM39-236ENST00000490484 CSNK1DP48730 415 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 AP1S1P61966 158 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 BCL2L1Q07817 233 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 RALGDSQ12967 914 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 LRRC14Q15048 493 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 TCEA2Q15560 299 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 WSCD2Q2TBF2 565 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 PRRT3Q5FWE3 981 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 ZCCHC8Q6NZY4 707 aaKnown RBP10.43□□□□□ -0.74
RBM39-236ENST00000490484 CPNE8Q86YQ8 564 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 ECHDC3Q96DC8 303 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 ZNF599Q96NL3 588 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 PSKH2Q96QS6 385 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 LRRC61Q9BV99 259 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 CTTNBP2NLQ9P2B4 639 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 SPASTQ9UBP0 616 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 PNMA8BQ9ULN7 279 aaPredicted RBP10.43□□□□□ -0.74
RBM39-236ENST00000490484 NENFQ9UMX5 172 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 CLCA2Q9UQC9 943 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 OR1A2Q9Y585 309 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.43□□□□□ -0.742e-18■□□□□ 11.1
RBM39-236ENST00000490484 U3KQA8 63 aa10.43□□□□□ -0.74
RBM39-236ENST00000490484 A8MX80 341 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 MFSD11O43934 449 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 PEX11BO96011 259 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 CELA2BP08218 269 aaPredicted RBP10.42□□□□□ -0.74
RBM39-236ENST00000490484 ELFN1P0C7U0 828 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 RENBPP51606 427 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 CDH6P55285 790 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 MAXP61244 160 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 YPEL5P62699 121 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 PPARDQ03181 441 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 NSUN2Q08J23 767 aaKnown RBP eCLIP10.42□□□□□ -0.74
RBM39-236ENST00000490484 MMRN1Q13201 1228 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 C1orf61Q13536 156 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 NFATC4Q14934 902 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 CDKN3Q16667 212 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 SPECC1LQ69YQ0 1117 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 C19orf48Q6RUI8 117 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 PGBD5Q8N414 524 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 FAM181AQ8N9Y4 354 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 RNF214Q8ND24 703 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 IFI44Q8TCB0 444 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 PDCD6IPQ8WUM4 868 aaKnown RBP10.42□□□□□ -0.74
RBM39-236ENST00000490484 BTN2A2Q8WVV5 523 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 RFFLQ8WZ73 363 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 NSMCE3Q96MG7 304 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 IL12RB2Q99665 862 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 PACSIN1Q9BY11 444 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 SLC13A1Q9BZW2 595 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 DEF6Q9H4E7 631 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 SCUBE2Q9NQ36 999 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 EVA1BQ9NVM1 165 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 DKK4Q9UBT3 224 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 LHX6Q9UPM6 363 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 GPSM3Q9Y4H4 160 aa10.42□□□□□ -0.74
RBM39-236ENST00000490484 SHROOM3Q8TF72 1996 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 LRP4O75096 1905 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 MYLKQ15746 1914 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 TRAFD1O14545 582 aaPredicted RBP10.41□□□□□ -0.74
RBM39-236ENST00000490484 TOR1BO14657 336 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 CBFA2T2O43439 604 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 MAFKO60675 156 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 GCATO75600 419 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 RECQL5O94762 991 aaPredicted RBP10.41□□□□□ -0.74
RBM39-236ENST00000490484 MAP3K6O95382 1288 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 CPP00450 1065 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 HTR1BP28222 390 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 HNRNPH3P31942 346 aaKnown RBP10.41□□□□□ -0.74
RBM39-236ENST00000490484 HSPA9P38646 679 aaKnown RBP10.41□□□□□ -0.74
RBM39-236ENST00000490484 MMP13P45452 471 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 DUSP3P51452 185 aaPredicted RBP10.41□□□□□ -0.74
RBM39-236ENST00000490484 E2F1Q01094 437 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 TRIM14Q14142 442 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 INPP5AQ14642 412 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 NR0B2Q15466 257 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 SLC18A3Q16572 532 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 HADHQ16836 314 aaKnown RBP10.41□□□□□ -0.74
RBM39-236ENST00000490484 ALG11Q2TAA5 492 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 SKOR2Q2VWA4 1001 aaPredicted RBP10.41□□□□□ -0.74
RBM39-236ENST00000490484 FAXCQ5TGI0 409 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 NCBP2-AS2Q69YL0 99 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 GUSBP11Q6P575 273 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 NYAP1Q6ZVC0 841 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 DPPA4Q7L190 304 aa10.41□□□□□ -0.74
RBM39-236ENST00000490484 EFL1Q7Z2Z2 1120 aaKnown RBP10.41□□□□□ -0.74
RBM39-236ENST00000490484 HID1Q8IV36 788 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms