RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TRIM55Q9BYV6 548 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 SLC29A3Q9BZD2 475 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 CYP3A43Q9HB55 503 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 MLXIPLQ9NP71 852 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 KCND3Q9UK17 655 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 ITGB1BP2Q9UKP3 347 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 PHTF1Q9UMS5 762 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 DOLKQ9UPQ8 538 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 HS3ST2Q9Y278 367 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 FBN1P35555 2871 aaKnown RBP7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 MXRA5Q9NR99 2828 aa7.21□□□□□ -1.25
PDLIM1-203ENST00000490391 ZGRF1Q86YA3 2104 aa7.21□□□□□ -1.25
PDLIM1-203ENST00000490391 K7ERQ8 282 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 XPO1O14980 1071 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 SMAD6O43541 496 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 NUDT21O43809 227 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 ZNF821O75541 412 aaPredicted RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 LEFTY1O75610 366 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 HLA-DRAP01903 254 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 FYNP06241 537 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 EIF4A3P38919 411 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 STAT5AP42229 794 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 ABL2P42684 1182 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 BLKP51451 505 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 NEK3P51956 506 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 LIMK2P53671 638 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 NR1D2Q14995 579 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 CLPPQ16740 277 aaPredicted RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 EDRF1Q3B7T1 1238 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 C14orf28Q4W4Y0 310 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 ZNF394Q53GI3 561 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 ZRANB3Q5FWF4 1079 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 C1orf220Q5T0J3 134 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 PAPD7Q5XG87 772 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 SP5Q6BEB4 398 aaPredicted RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 SHISA2Q6UWI4 295 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 LINGO4Q6UY18 593 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 C20orf204Q6ZNR8 217 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 PARS2Q7L3T8 475 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 ZNF438Q7Z4V0 828 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 TMEM135Q86UB9 458 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 PIM3Q86V86 326 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 ZSCAN30Q86W11 494 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 GKN2Q86XP6 184 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 HID1Q8IV36 788 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 APLFQ8IW19 511 aaPredicted RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 FAM184AQ8NB25 1140 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 AGBL5Q8NDL9 886 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 GRIN3AQ8TCU5 1115 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 DQX1Q8TE96 717 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 TSACCQ96A04 125 aaPredicted RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 VOPP1Q96AW1 172 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 C19orf60Q96EN9 201 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 IPO9Q96P70 1041 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 RBM15Q96T37 977 aaKnown RBP eCLIP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 PRMT1Q99873 361 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 FEM1AQ9BSK4 669 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 INTS2Q9H0H0 1204 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 DYRK4Q9NR20 520 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 OCIAD1Q9NX40 245 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 SLC39A1Q9NY26 324 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 LRIT1Q9P2V4 623 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 SLC25A13Q9UJS0 675 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 POLHQ9Y253 713 aa7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 TMEM184BQ9Y519 407 aaPredicted RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 OAS3Q9Y6K5 1087 aaKnown RBP7.21□□□□□ -1.26
PDLIM1-203ENST00000490391 CHD5Q8TDI0 1954 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 RTTNQ86VV8 2226 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 ABCA4P78363 2273 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 HEATR9A2RTY3 570 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 TCAF2A6NFQ2 919 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 DLGAP3O95886 979 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 MOCS2O96007 188 aaPredicted RBP7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 THRAP10827 490 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 TACR2P21452 398 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 RRM1P23921 792 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 CSF2RBP32927 897 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 NEK4P51957 841 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 RAD23BP54727 409 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 OR1D5P58170 312 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 SNRPFP62306 86 aaKnown RBP7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 DPYDQ12882 1025 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 SGCGQ13326 291 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 TRA2AQ13595 282 aaKnown RBP eCLIP7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 AMZ1Q400G9 498 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 DCAF12Q5T6F0 453 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 RAP1GAP2Q684P5 730 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 DPY19L3Q6ZPD9 716 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 STXBP4Q6ZWJ1 553 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 GDF7Q7Z4P5 450 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 CHSY1Q86X52 802 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 TP53I13Q8NBR0 393 aaPredicted RBP7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 CCDC112Q8NEF3 446 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 PPP1R16AQ96I34 528 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 TEFMQ96QE5 360 aaKnown RBP7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 RANBP9Q96S59 729 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 BACH2Q9BYV9 841 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 NIF3L1Q9GZT8 377 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 LRRC4Q9HBW1 653 aa7.2□□□□□ -1.26
PDLIM1-203ENST00000490391 CNGB3Q9NQW8 809 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms