RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 TFAP2AP05549 437 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 GJB1P08034 283 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 UBTFL6P0CB48 400 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 DLATP10515 647 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CDK4P11802 303 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 HARSP12081 509 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 UQCRBP14927 111 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 VCLP18206 1134 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 AOC1P19801 751 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 POU3F2P20265 443 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CYP2B6P20813 491 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CA4P22748 312 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ADRA1DP25100 572 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SERPINB3P29508 390 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 RPA3P35244 121 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CPOXP36551 454 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PGM1P36871 562 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CETN2P41208 172 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 KCNJ1P48048 391 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SCNN1BP51168 640 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SESN3P58005 492 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 KRTAP10-6P60371 365 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PSMC6P62333 389 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 RPS6P62753 249 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 MRPS9P82933 396 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 BEX3Q00994 111 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ALDH6A1Q02252 535 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SLC18A2Q05940 514 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 BFSP1Q12934 665 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PPIL2Q13356 520 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SNAPC2Q13487 334 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 DCTN2Q13561 401 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ALCAMQ13740 583 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 THOC5Q13769 683 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 BTG3Q14201 252 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PRKD1Q15139 912 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 MAPRE1Q15691 268 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 KCTD19Q17RG1 926 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ANKRD20A4Q4UJ75 823 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 C1orf220Q5T0J3 134 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 OGFRL1Q5TC84 451 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 LRRC38Q5VT99 294 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 AGBL4Q5VU57 503 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CCDC62Q6P9F0 684 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PGM2L1Q6PCE3 622 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 LVRNQ6Q4G3 990 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 B3GNT6Q6ZMB0 384 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 Q6ZNX1 250 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CATSPERGQ6ZRH7 1159 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 STXBP4Q6ZWJ1 553 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 C1orf186Q6ZWK4 172 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CENPUQ71F23 418 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 C14orf80Q86SX3 495 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ZNF554Q86TJ5 538 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PRUNE1Q86TP1 453 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 LRRC6Q86X45 466 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CIR1Q86X95 450 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CATSPER3Q86XQ3 398 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ULK2Q8IYT8 1036 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ZBED8Q8IZ13 594 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CHPFQ8IZ52 775 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 AHI1Q8N157 1196 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 VPS52Q8N1B4 723 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ATP11CQ8NB49 1132 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CHST14Q8NCH0 376 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 RBM15BQ8NDT2 890 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 TRPV1Q8NER1 839 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SVIPQ8NHG7 77 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 RFWD2Q8NHY2 731 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 RAB3IL1Q8TBN0 382 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CCDC110Q8TBZ0 833 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 FNDC8Q8TC99 324 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 DCAKDQ8WVC6 231 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 C1orf54Q8WWF1 131 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ATG4AQ8WYN0 398 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SLC35B4Q969S0 331 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 MFSD3Q96ES6 412 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PRR11Q96HE9 360 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 OXNAD1Q96HP4 312 aaPredicted RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 DYDC2Q96IM9 177 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CAPNS2Q96L46 248 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 CCDC17Q96LX7 622 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 FAM20AQ96MK3 541 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 BIRC8Q96P09 236 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PANX3Q96QZ0 392 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 FOXB1Q99853 325 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 HSD17B14Q9BPX1 270 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SIKE1Q9BRV8 207 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 WDR83Q9BRX9 315 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 BOCQ9BWV1 1114 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 MAK16Q9BXY0 300 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ZCWPW1Q9H0M4 648 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 VPS33BQ9H267 617 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ST6GALNAC4Q9H4F1 302 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 STN1Q9H668 368 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 MANSC1Q9H8J5 431 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 USP29Q9HBJ7 922 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PCDH9Q9HC56 1237 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 S100A14Q9HCY8 104 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 ETNK2Q9NVF9 386 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms