RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 TBC1D3EA0A087X179 549 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 TBC1D3KA0A087X1G2 549 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 LOC285095A0A1B0GVY8 99 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 A0A1W2PPC4 97 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 TBC1D3FA6NER0 549 aaPredicted RBP17.55■□□□□ 0.4
ERCC3-207ENST00000490062 TBC1D3LB9A6J9 549 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 ANXA9O76027 345 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 PDHA1P08559 390 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 TBC1D3HP0C7X1 549 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 CD27P26842 260 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 GRIA4P48058 902 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 GDF10P55107 478 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 PPP2CBP62714 309 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 RPS21P63220 83 aaKnown RBP17.55■□□□□ 0.4
ERCC3-207ENST00000490062 PPP2CAP67775 309 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 CREB5Q02930 508 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 MPP3Q13368 585 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 PARP6Q2NL67 630 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 PLA2G2CQ5R387 149 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 TBC1D3GQ6DHY5 549 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 TBC1D3CQ6IPX1 549 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 ERAP2Q6P179 960 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 DPPA4Q7L190 304 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 RABEPKQ7Z6M1 372 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 ADAT2Q7Z6V5 191 aaKnown RBP17.55■□□□□ 0.4
ERCC3-207ENST00000490062 SYT12Q8IV01 421 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 TBC1D3Q8IZP1 549 aaPredicted RBP17.55■□□□□ 0.4
ERCC3-207ENST00000490062 CBARPQ8N350 705 aaPredicted RBP17.55■□□□□ 0.4
ERCC3-207ENST00000490062 FAM71DQ8N9W8 422 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 OXNAD1Q96HP4 312 aaPredicted RBP17.55■□□□□ 0.4
ERCC3-207ENST00000490062 MS4A14Q96JA4 679 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 RBM15Q96T37 977 aaKnown RBP eCLIP17.55■□□□□ 0.44e-6■□□□□ 11.3
ERCC3-207ENST00000490062 GORASP1Q9BQQ3 440 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 C1QTNF2Q9BXJ5 285 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 PCDH9Q9HC56 1237 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 RSPH14Q9UHP6 348 aa17.55■□□□□ 0.4
ERCC3-207ENST00000490062 ZFR2Q9UPR6 939 aaKnown RBP17.55■□□□□ 0.4
ERCC3-207ENST00000490062 MYO15AQ9UKN7 3530 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 A0A0J9YYE9 177 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 PRR23AA6NEV1 266 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 ZNF185O15231 689 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 RNGTTO60942 597 aaKnown RBP17.54■□□□□ 0.4
ERCC3-207ENST00000490062 TRBC1P01850 177 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 XPAP23025 273 aaPredicted RBP17.54■□□□□ 0.4
ERCC3-207ENST00000490062 GEMP55040 296 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 CDK18Q07002 472 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 RALGDSQ12967 914 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 ZNF284Q2VY69 593 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 C4orf22Q6V702 233 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 NDUFAF2Q8N183 169 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 SPATA22Q8NHS9 363 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 CCDC110Q8TBZ0 833 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 ADGRE3Q9BY15 652 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 SUSD2Q9UGT4 822 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 ZNF148Q9UQR1 794 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 AAR2Q9Y312 384 aaKnown RBP17.54■□□□□ 0.4
ERCC3-207ENST00000490062 DMDP11532 3685 aa17.54■□□□□ 0.4
ERCC3-207ENST00000490062 CACNA1EQ15878 2313 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 A0A1W2PQU0 124 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 CAPN8A6NHC0 703 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 ANKRD66B4E2M5 251 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 KIF2AO00139 706 aaPredicted RBP17.53■□□□□ 0.4
ERCC3-207ENST00000490062 PSMD11O00231 422 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 NDST3O95803 873 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 MT-CYBP00156 380 aaPredicted RBP17.53■□□□□ 0.4
ERCC3-207ENST00000490062 FNTAP49354 379 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 DHPSP49366 369 aaPredicted RBP17.53■□□□□ 0.4
ERCC3-207ENST00000490062 LMNB2Q03252 620 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 USP45Q70EL2 814 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 CYP2U1Q7Z449 544 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 DENND6BQ8NEG7 585 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 ATL2Q8NHH9 583 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 MRGPRX2Q96LB1 330 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 LENG8Q96PV6 779 aaPredicted RBP17.53■□□□□ 0.4
ERCC3-207ENST00000490062 SRPK1Q96SB4 655 aaKnown RBP17.53■□□□□ 0.4
ERCC3-207ENST00000490062 PHOX2BQ99453 314 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 EBF2Q9HAK2 575 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 GMEB2Q9UKD1 530 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 CHKBQ9Y259 395 aa17.53■□□□□ 0.4
ERCC3-207ENST00000490062 GOLGA6L10A0A0M3HER8 536 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 FAM47DPA6NHR8 397 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 MEI4A8MW99 385 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 PRR5-ARHGAP8B1AHC4 643 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 FSBPO95073 299 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 CYP2A6P11509 494 aaPredicted RBP17.52■□□□□ 0.4
ERCC3-207ENST00000490062 ZNF30P17039 623 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 ITPKAP23677 461 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 PSMB4P28070 264 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 CASQ1P31415 396 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 VIPR1P32241 457 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 ADRA1AP35348 466 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 WNT3AP56704 352 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 QPCTQ16769 361 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 SETMARQ53H47 684 aaPredicted RBP17.52■□□□□ 0.4
ERCC3-207ENST00000490062 KCTD11Q693B1 232 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 RANBP10Q6VN20 620 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 SYT10Q6XYQ8 523 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 LIPIQ6XZB0 460 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 TMEM145Q8NBT3 493 aa17.52■□□□□ 0.4
ERCC3-207ENST00000490062 CEP76Q8TAP6 659 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms