RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 TKTL2Q9H0I9 626 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 CISD1Q9NZ45 108 aaKnown RBP5.33□□□□□ -1.56
CCDC39-206ENST00000489868 A0A0U1RQJ8 604 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 A0A1B0GVC2 190 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 TNFSF14O43557 240 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 F9P00740 461 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 PCNAP12004 261 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 ETFAP13804 333 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 AGAP20933 346 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 HDAC4P56524 1084 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 BRWD1-AS2P59051 145 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 SEC61A1P61619 476 aaKnown RBP5.32□□□□□ -1.56
CCDC39-206ENST00000489868 DDR1Q08345 913 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 PTP4A2Q12974 167 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 VEPH1Q14D04 833 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 FAM69AQ5T7M9 428 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 NAA35Q5VZE5 725 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 C9orf57Q5W0N0 161 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 FBXO46Q6PJ61 603 aaPredicted RBP5.32□□□□□ -1.56
CCDC39-206ENST00000489868 CREB3L2Q70SY1 520 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 SHFQ7M4L6 423 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 SLC35F3Q8IY50 421 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 ZNF114Q8NC26 417 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 BBS4Q96RK4 519 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 PAIP1Q9H074 479 aaKnown RBP5.32□□□□□ -1.56
CCDC39-206ENST00000489868 USP44Q9H0E7 712 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 SLC25A18Q9H1K4 315 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 SMYD2Q9NRG4 433 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 SLC13A4Q9UKG4 626 aa5.32□□□□□ -1.56
CCDC39-206ENST00000489868 LSM4Q9Y4Z0 139 aaKnown RBP5.32□□□□□ -1.56
CCDC39-206ENST00000489868 ARID4BQ4LE39 1312 aaPredicted RBP5.31□□□□□ -1.56
CCDC39-206ENST00000489868 CPED1A4D0V7 1026 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 A6NLC8 198 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 WNT9BO14905 357 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 BCAT2O15382 392 aaPredicted RBP5.31□□□□□ -1.56
CCDC39-206ENST00000489868 AFPP02771 609 aaKnown RBP5.31□□□□□ -1.56
CCDC39-206ENST00000489868 FGF3P11487 239 aaPredicted RBP5.31□□□□□ -1.56
CCDC39-206ENST00000489868 COX7A2P14406 83 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 SHMT1P34896 483 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 HLFQ16534 295 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 MMEL1Q495T6 779 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 IL17REQ8NFR9 667 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 PABPC5Q96DU9 382 aaKnown RBP5.31□□□□□ -1.56
CCDC39-206ENST00000489868 FAM84BQ96KN1 310 aaPredicted RBP5.31□□□□□ -1.56
CCDC39-206ENST00000489868 SIN3AQ96ST3 1273 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 PLEKHA4Q9H4M7 779 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 GAREM1Q9H706 876 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 NOX4Q9NPH5 578 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 PPP1R14DQ9NXH3 145 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 SLC9A2Q9UBY0 812 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 SARDHQ9UL12 918 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 GTF2A1LQ9UNN4 478 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 PROCRQ9UNN8 238 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 NAALADL1Q9UQQ1 740 aa5.31□□□□□ -1.56
CCDC39-206ENST00000489868 TAF4O00268 1085 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 SEC31AO94979 1220 aaKnown RBP5.3□□□□□ -1.56
CCDC39-206ENST00000489868 ATP1A3P13637 1013 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 XBP1P17861 261 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 ART1P52961 327 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 TUBA1BP68363 451 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 MYBPHQ13203 477 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 XKR9Q5GH70 373 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 EFHC1Q5JVL4 640 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 PAPPA-AS1Q5QFB9 102 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 CAPRIN2Q6IMN6 1127 aaKnown RBP5.3□□□□□ -1.56
CCDC39-206ENST00000489868 DLK2Q6UY11 383 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 B3GNT6Q6ZMB0 384 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 MTSS1LQ765P7 747 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 KIF1BPQ96EK5 621 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 SCMH1Q96GD3 660 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 LRFN5Q96NI6 719 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 SPRY4Q9C004 299 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 KCNN2Q9H2S1 579 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 C6orf106Q9H6K1 298 aaPredicted RBP5.3□□□□□ -1.56
CCDC39-206ENST00000489868 ESRP2Q9H6T0 727 aaKnown RBP5.3□□□□□ -1.56
CCDC39-206ENST00000489868 UBN1Q9NPG3 1134 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 KCND2Q9NZV8 630 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 PGAP2Q9UHJ9 254 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 ARHGAP26Q9UNA1 814 aa5.3□□□□□ -1.56
CCDC39-206ENST00000489868 CCDC196A0A1B0GTZ2 297 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 hDV102S1A0JD36 115 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 SNAP23O00161 211 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 ZIC3O60481 467 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 NDUFB4O95168 129 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 MT-CYBP00156 380 aaPredicted RBP5.29□□□□□ -1.56
CCDC39-206ENST00000489868 TFP02787 698 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 KRTAP10-9P60411 292 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 TRAF2Q12933 501 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 PPP2R5BQ15173 497 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 C2orf68Q2NKX9 166 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 RHBDF2Q6PJF5 856 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 KLHL24Q6TFL4 600 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 ZC3HC1Q86WB0 502 aaKnown RBP5.29□□□□□ -1.56
CCDC39-206ENST00000489868 FOXRED2Q8IWF2 684 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 TCP11L2Q8N4U5 519 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 LILRB1Q8NHL6 650 aaPredicted RBP5.29□□□□□ -1.56
CCDC39-206ENST00000489868 ZUFSPQ96AP4 578 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 FBXL8Q96CD0 374 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 KLHL29Q96CT2 875 aa5.29□□□□□ -1.56
CCDC39-206ENST00000489868 TBATAQ96M53 351 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms