RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 HCAR2Q8TDS4 363 aa7.92□□□□□ -1.14
SSR1-210ENST00000489567 PDCD6IPQ8WUM4 868 aaKnown RBP7.92□□□□□ -1.14
SSR1-210ENST00000489567 MYOCQ99972 504 aa7.92□□□□□ -1.14
SSR1-210ENST00000489567 WRAP53Q9BUR4 548 aaKnown RBP7.92□□□□□ -1.14
SSR1-210ENST00000489567 BRD8Q9H0E9 1235 aa7.92□□□□□ -1.14
SSR1-210ENST00000489567 CAPN10Q9HC96 672 aa7.92□□□□□ -1.14
SSR1-210ENST00000489567 FZD3Q9NPG1 666 aa7.92□□□□□ -1.14
SSR1-210ENST00000489567 VPS45Q9NRW7 570 aa7.92□□□□□ -1.14
SSR1-210ENST00000489567 AMACRQ9UHK6 382 aa7.92□□□□□ -1.14
SSR1-210ENST00000489567 PCDHB9Q9Y5E1 797 aa7.92□□□□□ -1.14
SSR1-210ENST00000489567 RAI2Q9Y5P3 530 aa7.92□□□□□ -1.14
SSR1-210ENST00000489567 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.92□□□□□ -1.142e-7■■□□□ 13.3
SSR1-210ENST00000489567 ANKRD36A6QL64 1941 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.91□□□□□ -1.14
SSR1-210ENST00000489567 F5H423 210 aaPredicted RBP7.91□□□□□ -1.14
SSR1-210ENST00000489567 H7C0C1 242 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 RAD51BO15315 384 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 GPR37O15354 613 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 ZSCAN12O43309 604 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 FZD6O60353 706 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 MMP20O60882 483 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 SOCS5O75159 536 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 PGLSO95336 258 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 PAK4O96013 591 aaPredicted RBP7.91□□□□□ -1.14
SSR1-210ENST00000489567 WNT1P04628 370 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 RBP3P10745 1247 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 HOXD12P35452 270 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 MMP12P39900 470 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 CETN2P41208 172 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 CD86P42081 329 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 ATP5OP48047 213 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 CSNK1EP49674 416 aaKnown RBP7.91□□□□□ -1.14
SSR1-210ENST00000489567 SKOR1P84550 965 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 CCDC15Q0P6D6 951 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 RALGDSQ12967 914 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 XRCC4Q13426 336 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 SIX1Q15475 284 aaPredicted RBP7.91□□□□□ -1.14
SSR1-210ENST00000489567 DUOXA1Q1HG43 343 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 RALGPS1Q5JS13 557 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 ZNF569Q5MCW4 686 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 CFAP58Q5T655 872 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 NEK5Q6P3R8 708 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 MTERF4Q7Z6M4 381 aaKnown RBP7.91□□□□□ -1.14
SSR1-210ENST00000489567 SLC35F6Q8N357 371 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 C17orf53Q8N3J3 647 aaPredicted RBP7.91□□□□□ -1.14
SSR1-210ENST00000489567 SPATA22Q8NHS9 363 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 PIH1D2Q8WWB5 315 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 HTR3CQ8WXA8 447 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 ATG4AQ8WYN0 398 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 RAB7BQ96AH8 199 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 TADA1Q96BN2 335 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 IMP4Q96G21 291 aaKnown RBP7.91□□□□□ -1.14
SSR1-210ENST00000489567 SERAC1Q96JX3 654 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 TEKT5Q96M29 485 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 RBM15Q96T37 977 aaKnown RBP eCLIP7.91□□□□□ -1.144e-9■□□□□ 10.4
SSR1-210ENST00000489567 CARD9Q9H257 536 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 USP29Q9HBJ7 922 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 CHKBQ9Y259 395 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 COQ6Q9Y2Z9 468 aa7.91□□□□□ -1.14
SSR1-210ENST00000489567 RALGAPA1Q6GYQ0 2036 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 RIF1Q5UIP0 2472 aaKnown RBP7.9□□□□□ -1.14
SSR1-210ENST00000489567 DCHS1Q96JQ0 3298 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 PCDH15Q96QU1 1955 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 A0A1B0GTW7 788 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 A0A1B0GVT2 93 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 A0A1W2PR77 199 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 HACD1B0YJ81 288 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 H0Y8X5 98 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 NEMP1O14524 444 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 KHNYNO15037 678 aaKnown RBP7.9□□□□□ -1.14
SSR1-210ENST00000489567 TSPAN6O43657 245 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 NEBLO76041 1014 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 MT-CYBP00156 380 aaPredicted RBP7.9□□□□□ -1.14
SSR1-210ENST00000489567 CPP00450 1065 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 ATP1A1P05023 1023 aaKnown RBP7.9□□□□□ -1.14
SSR1-210ENST00000489567 SERPINF2P08697 491 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 ALPIP09923 528 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 CTPS1P17812 591 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 NFKB1P19838 968 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 CLDN2P57739 230 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 RPS21P63220 83 aaKnown RBP7.9□□□□□ -1.14
SSR1-210ENST00000489567 RACK1P63244 317 aaKnown RBP7.9□□□□□ -1.14
SSR1-210ENST00000489567 KCTD19Q17RG1 926 aaPredicted RBP7.9□□□□□ -1.14
SSR1-210ENST00000489567 TMEM52BQ4KMG9 183 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 SEL1L2Q5TEA6 688 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 SLC13A5Q86YT5 568 aaPredicted RBP7.9□□□□□ -1.14
SSR1-210ENST00000489567 TMEM145Q8NBT3 493 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 SLC35B2Q8TB61 432 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 FEM1CQ96JP0 617 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 KLF6Q99612 283 aaPredicted RBP7.9□□□□□ -1.14
SSR1-210ENST00000489567 GORASP1Q9BQQ3 440 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 C1QTNF2Q9BXJ5 285 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 TDRD1Q9BXT4 1180 aaKnown RBP7.9□□□□□ -1.14
SSR1-210ENST00000489567 SLC17A9Q9BYT1 436 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 CAAP1Q9H8G2 361 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 GLOD4Q9HC38 313 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 UBP1Q9NZI7 540 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 B4GALT6Q9UBX8 382 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 DNPEPQ9ULA0 475 aa7.9□□□□□ -1.14
SSR1-210ENST00000489567 SLC6A14Q9UN76 642 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms