RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 TRPM8Q7Z2W7 1104 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 STRA8Q7Z7C7 330 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 C14orf80Q86SX3 495 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 RNF135Q8IUD6 432 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 CRLF3Q8IUI8 442 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 NUDCD3Q8IVD9 361 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 IGDCC3Q8IVU1 814 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 LRRC34Q8IZ02 419 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 C4orf33Q8N1A6 199 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 BEND7Q8N7W2 519 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 CNTD1Q8N815 330 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 CCDC63Q8NA47 563 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 IPMKQ8NFU5 416 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 GDAP1Q8TB36 358 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 MGARPQ8TDB4 240 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 BRSK1Q8TDC3 778 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 STYXQ8WUJ0 223 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 STON2Q8WXE9 905 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF75CPQ92670 426 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 PPP2R3CQ969Q6 453 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 E2F7Q96AV8 911 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 TMA16Q96EY4 203 aaKnown RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 HMCESQ96FZ2 354 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 LRRC37BQ96QE4 947 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 ELAC2Q9BQ52 826 aaKnown RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 MGME1Q9BQP7 344 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 MLPHQ9BV36 600 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 FICDQ9BVA6 458 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 TSSK1BQ9BXA7 367 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 WWP1Q9H0M0 922 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 ZBP1Q9H171 429 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 CCSER2Q9H7U1 834 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 ATP13A1Q9HD20 1204 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 NT5MQ9NPB1 228 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 ASAH2Q9NR71 780 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 THAP1Q9NVV9 213 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 MPP6Q9NZW5 540 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 TMCO1Q9UM00 188 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 PHTF1Q9UMS5 762 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 SLC8A2Q9UPR5 921 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 RRP15Q9Y3B9 282 aaKnown RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 MRPL42Q9Y6G3 142 aaKnown RBP6.42□□□□□ -1.38
SF3A3-208ENST00000489537 COMMD10Q9Y6G5 202 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 SLC4A7Q9Y6M7 1214 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 PLXNA3P51805 1871 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 PTPRDP23468 1912 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 MYO7AQ13402 2215 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 COL4A6Q14031 1691 aa6.42□□□□□ -1.38
SF3A3-208ENST00000489537 TMEM265A0A087WTH1 108 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 E2F8A0AVK6 867 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TMEM114B3SHH9 223 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 C2CD2LO14523 706 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TRAFD1O14545 582 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TEX28O15482 410 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 INSIG1O15503 277 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 ATP9BO43861 1147 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 CCDC22O60826 627 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 PMPCBO75439 489 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 BANF1O75531 89 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 RFPL1O75677 317 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 FSBPO95073 299 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 VNN2O95498 520 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 CXCL14O95715 111 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 PENKP01210 267 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 SERPINE1P05121 402 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 HLA-DQB2P05538 268 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 EZRP15311 586 aaKnown RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 PTPN2P17706 415 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 OGNP20774 298 aaKnown RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 IGFBP4P22692 258 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 AVPR1AP37288 418 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 ETV4P43268 484 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 MAGEA9P43362 315 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 MAGEA12P43365 314 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 CD151P48509 253 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 GPR15P49685 360 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 GATMP50440 423 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 KCNQ1P51787 676 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 PRAMEP78395 509 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 IRX1P78414 480 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TMPRSS15P98073 1019 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 GAD2Q05329 585 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 STX3Q13277 289 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 CDH18Q13634 790 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 LRRC14Q15048 493 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 FAM83EQ2M2I3 478 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 PPM1LQ5SGD2 360 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TSTD2Q5T7W7 516 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 TEDDM1Q5T9Z0 273 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 MROH9Q5TGP6 573 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 AGAP9Q5VTM2 703 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 SDHAF4Q5VUM1 108 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 ZDHHC20Q5W0Z9 365 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 NEPROQ6NW34 567 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 KDELC1Q6UW63 502 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 C6orf89Q6UWU4 347 aa6.41□□□□□ -1.38
SF3A3-208ENST00000489537 RSPO2Q6UXX9 243 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-208ENST00000489537 SH2D5Q6ZV89 423 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms