RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 TMCO3Q6UWJ1 677 aa12.65□□□□□ -0.38
SRRM1-216ENST00000489130 DCBLD1Q8N8Z6 715 aa12.65□□□□□ -0.38
SRRM1-216ENST00000489130 FAM71BQ8TC56 605 aa12.65□□□□□ -0.38
SRRM1-216ENST00000489130 BTN2A2Q8WVV5 523 aa12.65□□□□□ -0.38
SRRM1-216ENST00000489130 NXPE2Q96DL1 559 aa12.65□□□□□ -0.38
SRRM1-216ENST00000489130 XPO4Q9C0E2 1151 aaKnown RBP12.65□□□□□ -0.38
SRRM1-216ENST00000489130 PCDH18Q9HCL0 1135 aa12.65□□□□□ -0.38
SRRM1-216ENST00000489130 RCOR3Q9P2K3 495 aaPredicted RBP12.65□□□□□ -0.38
SRRM1-216ENST00000489130 PNMA8BQ9ULN7 279 aaPredicted RBP12.65□□□□□ -0.38
SRRM1-216ENST00000489130 CLCA2Q9UQC9 943 aa12.65□□□□□ -0.38
SRRM1-216ENST00000489130 RAXQ9Y2V3 346 aa12.65□□□□□ -0.38
SRRM1-216ENST00000489130 COQ6Q9Y2Z9 468 aa12.65□□□□□ -0.38
SRRM1-216ENST00000489130 GPSM3Q9Y4H4 160 aa12.65□□□□□ -0.38
SRRM1-216ENST00000489130 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.65□□□□□ -0.38
SRRM1-216ENST00000489130 PKD1L2Q7Z442 2459 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 MYO1FO00160 1098 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 MAFKO60675 156 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 GP1BAP07359 652 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 CR2P20023 1033 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 SERPINB6P35237 376 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 HSPA9P38646 679 aaKnown RBP12.64□□□□□ -0.39
SRRM1-216ENST00000489130 EIF4A3P38919 411 aaKnown RBP12.64□□□□□ -0.39
SRRM1-216ENST00000489130 LIG3P49916 1009 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 SCNN1BP51168 640 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 POLR2LP62875 67 aaKnown RBP12.64□□□□□ -0.39
SRRM1-216ENST00000489130 RALGDSQ12967 914 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 WSCD2Q2TBF2 565 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 PHACTR4Q8IZ21 702 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 RBFAQ8N0V3 343 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 LMX1AQ8TE12 382 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 NSMCE3Q96MG7 304 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 MGME1Q9BQP7 344 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 LRRC61Q9BV99 259 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 NRSN2Q9GZP1 204 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 TCEAL2Q9H3H9 227 aaPredicted RBP12.64□□□□□ -0.39
SRRM1-216ENST00000489130 EVA1BQ9NVM1 165 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 NCKIPSDQ9NZQ3 722 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 SPASTQ9UBP0 616 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 APOBEC3BQ9UH17 382 aaKnown RBP12.64□□□□□ -0.39
SRRM1-216ENST00000489130 SALL4Q9UJQ4 1053 aa12.64□□□□□ -0.39
SRRM1-216ENST00000489130 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.63□□□□□ -0.39
SRRM1-216ENST00000489130 TMEM110-MUSTN1A8MSY1 372 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 HTRA2O43464 458 aaPredicted RBP12.63□□□□□ -0.39
SRRM1-216ENST00000489130 SOCS5O75159 536 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 PRKCGP05129 697 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 IL4RP24394 825 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 DUSP3P51452 185 aaPredicted RBP12.63□□□□□ -0.39
SRRM1-216ENST00000489130 ARSEP51690 589 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 CDH6P55285 790 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 MTM1Q13496 603 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 ZNF235Q14590 738 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 RTP5Q14D33 572 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 SLC18A3Q16572 532 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 PRRT3Q5FWE3 981 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 CDCP2Q5VXM1 449 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 SPECC1LQ69YQ0 1117 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 ATPAF2Q8N5M1 289 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 ZNF564Q8TBZ8 553 aaPredicted RBP12.63□□□□□ -0.39
SRRM1-216ENST00000489130 NUDCD1Q96RS6 583 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 DNAJC7Q99615 494 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 BOCQ9BWV1 1114 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 SLC13A1Q9BZW2 595 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 CHD6Q8TD26 2715 aa12.63□□□□□ -0.39
SRRM1-216ENST00000489130 A0A1W2PQ67 120 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 LMO7DNF2Z398 122 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 LZTS3O60299 673 aaPredicted RBP12.62□□□□□ -0.39
SRRM1-216ENST00000489130 OPA1O60313 960 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 GCATO75600 419 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 MT-CO3P00414 261 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 CD48P09326 243 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 ELFN1P0C7U0 828 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 MYF5P13349 255 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 BLKP51451 505 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 SEMG2Q02383 582 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 PPARDQ03181 441 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 TRIM14Q14142 442 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 KRT81Q14533 505 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 INPP5AQ14642 412 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 NFATC4Q14934 902 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 HADHQ16836 314 aaKnown RBP12.62□□□□□ -0.39
SRRM1-216ENST00000489130 ASTE1Q2TB18 679 aaPredicted RBP12.62□□□□□ -0.39
SRRM1-216ENST00000489130 DEFB133Q30KQ1 61 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 RALGPS1Q5JS13 557 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 FAXCQ5TGI0 409 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 LIPIQ6XZB0 460 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 DPPA4Q7L190 304 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 LRRC49Q8IUZ0 686 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 BBS5Q8N3I7 341 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 PGBD5Q8N414 524 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 OR8K1Q8NGG5 319 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 IFI44Q8TCB0 444 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 IL12RB2Q99665 862 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 APOOQ9BUR5 198 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 SCUBE2Q9NQ36 999 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 UVRAGQ9P2Y5 699 aa12.62□□□□□ -0.39
SRRM1-216ENST00000489130 RALYQ9UKM9 306 aaKnown RBP12.62□□□□□ -0.39
SRRM1-216ENST00000489130 A0A087WV48 116 aa12.61□□□□□ -0.39
SRRM1-216ENST00000489130 SSU72P8A0A1W2PR75 194 aa12.61□□□□□ -0.39
SRRM1-216ENST00000489130 TTC24A2A3L6 582 aaPredicted RBP12.61□□□□□ -0.39
SRRM1-216ENST00000489130 EME2A4GXA9 379 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms