RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 HIST2H2BCQ6DN03 193 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 HIST2H2BDQ6DRA6 164 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 ANKRD54Q6NXT1 300 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 KLHL24Q6TFL4 600 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 ZC3HC1Q86WB0 502 aaKnown RBP3.75□□□□□ -1.81
RFC4-213ENST00000489028 DHX40Q8IX18 779 aaKnown RBP3.75□□□□□ -1.81
RFC4-213ENST00000489028 MYRIPQ8NFW9 859 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 LRFN5Q96NI6 719 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 MPHOSPH8Q99549 860 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 FUZQ9BT04 418 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 GLIS2Q9BZE0 524 aaPredicted RBP3.75□□□□□ -1.81
RFC4-213ENST00000489028 C20orf141Q9NUB4 165 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 CISD1Q9NZ45 108 aaKnown RBP3.75□□□□□ -1.81
RFC4-213ENST00000489028 CARD8Q9Y2G2 431 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 NFE2L3Q9Y4A8 694 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 RRN3P2A6NIE6 340 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 SLC16A5O15375 505 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 NCAM2O15394 837 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 NDUFS7O75251 213 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 GALNT2Q10471 571 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 SNTA1Q13424 505 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 BIRC3Q13489 604 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 SLC39A14Q15043 492 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 TAF11Q15544 211 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 MMEL1Q495T6 779 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 SGO1Q5FBB7 561 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 TMTC1Q8IUR5 882 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 SPRY4Q9C004 299 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 RETREG1Q9H6L5 497 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 ESRP2Q9H6T0 727 aaKnown RBP3.74□□□□□ -1.81
RFC4-213ENST00000489028 SMYD2Q9NRG4 433 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 MALT1Q9UDY8 824 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 SLCO3A1Q9UIG8 710 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 KCNG2Q9UJ96 466 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 CDC14AQ9UNH5 594 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.74□□□□□ -1.81
RFC4-213ENST00000489028 PAM16Q9Y3D7 125 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 NFS1Q9Y697 457 aa3.74□□□□□ -1.81
RFC4-213ENST00000489028 LOC102724159A0A0B4J2E5 919 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 GAGE10A6NGK3 116 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 TNPO2O14787 897 aaKnown RBP3.73□□□□□ -1.81
RFC4-213ENST00000489028 BCAT2O15382 392 aaPredicted RBP3.73□□□□□ -1.81
RFC4-213ENST00000489028 KDM4BO94953 1096 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 NDUFB4O95168 129 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 CLDN14O95500 239 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 SNRNP70P08621 437 aaKnown RBP3.73□□□□□ -1.81
RFC4-213ENST00000489028 PCNAP12004 261 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 ETFAP13804 333 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 AGAP20933 346 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 CHATP28329 748 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 HNRNPH1P31943 449 aaKnown RBP3.73□□□□□ -1.81
RFC4-213ENST00000489028 CCT5P48643 541 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 PWP2Q15269 919 aaKnown RBP3.73□□□□□ -1.81
RFC4-213ENST00000489028 PRICKLE4Q2TBC4 344 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 SLC9C2Q5TAH2 1124 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 FBXO46Q6PJ61 603 aaPredicted RBP3.73□□□□□ -1.81
RFC4-213ENST00000489028 B3GNT6Q6ZMB0 384 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 Q6ZTC4 211 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 MTSS1LQ765P7 747 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 CUZD1Q86UP6 607 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 TDRPQ86YL5 185 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 FOXRED2Q8IWF2 684 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 SLC35F3Q8IY50 421 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 SPATA22Q8NHS9 363 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 SPATA20Q8TB22 786 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 CREB3L4Q8TEY5 395 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 HTRA1Q92743 480 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 IGSF21Q96ID5 467 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 BBS4Q96RK4 519 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 SIN3AQ96ST3 1273 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 HAUS8Q9BT25 410 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 TKTL2Q9H0I9 626 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 KCNN2Q9H2S1 579 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 HCN3Q9P1Z3 774 aa3.73□□□□□ -1.81
RFC4-213ENST00000489028 TULP2O00295 520 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 HOXC11O43248 304 aaPredicted RBP3.72□□□□□ -1.81
RFC4-213ENST00000489028 GUCY1B2O75343 617 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 PMS2P2O95744 297 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 PYGLP06737 847 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 CYC1P08574 325 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 IFIT1P09914 478 aaKnown RBP3.72□□□□□ -1.81
RFC4-213ENST00000489028 LINC00271P0C7V0 271 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 DAOP14920 347 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 POU1F1P28069 291 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 SHMT1P34896 483 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 EIF2S3P41091 472 aaKnown RBP3.72□□□□□ -1.81
RFC4-213ENST00000489028 MAPK9P45984 424 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 TUBP50607 506 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 DLX5P56178 289 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 UFM1P61960 85 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 POU5F1BQ06416 359 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 TRPC3Q13507 836 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 VEPH1Q14D04 833 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 RNPS1Q15287 305 aaKnown RBP3.72□□□□□ -1.81
RFC4-213ENST00000489028 ZNF718Q3SXZ3 478 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 AMZ1Q400G9 498 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 SLC9B1Q4ZJI4 515 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 TXNDC8Q6A555 127 aa3.72□□□□□ -1.81
RFC4-213ENST00000489028 ZNF771Q7L3S4 317 aaPredicted RBP3.72□□□□□ -1.81
RFC4-213ENST00000489028 C11orf65Q8NCR3 313 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms