RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 LYSMD1Q96S90 227 aa16.12■□□□□ 0.17
CLDN11-208ENST00000488989 EBNA1BP2Q99848 306 aaKnown RBP16.12■□□□□ 0.17
CLDN11-208ENST00000488989 NAT9Q9BTE0 207 aa16.12■□□□□ 0.17
CLDN11-208ENST00000488989 RSPH9Q9H1X1 276 aaPredicted RBP16.12■□□□□ 0.17
CLDN11-208ENST00000488989 CDC42EP4Q9H3Q1 356 aaKnown RBP16.12■□□□□ 0.17
CLDN11-208ENST00000488989 MRM3Q9HC36 420 aaKnown RBP16.12■□□□□ 0.17
CLDN11-208ENST00000488989 PIH1D1Q9NWS0 290 aaKnown RBP16.12■□□□□ 0.17
CLDN11-208ENST00000488989 SYBUQ9NX95 663 aa16.12■□□□□ 0.17
CLDN11-208ENST00000488989 NDRG2Q9UN36 371 aaKnown RBP16.12■□□□□ 0.17
CLDN11-208ENST00000488989 A0A0J9YYE9 177 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 A0A1W2PQF6 199 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 MAGEB16A2A368 324 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 KLF8O95600 359 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-208ENST00000488989 CPP00450 1065 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 TRBC1P01850 177 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 TSHRP16473 764 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 ELK3P41970 407 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 WASP42768 502 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 PCID2Q5JVF3 399 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 EOGTQ5NDL2 527 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 TRMT10CQ7L0Y3 403 aaKnown RBP16.11■□□□□ 0.17
CLDN11-208ENST00000488989 IGDCC3Q8IVU1 814 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 ZBED8Q8IZ13 594 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 OR2T3Q8NH03 318 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 PIP4K2CQ8TBX8 421 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 GRIN3AQ8TCU5 1115 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 PDCD6IPQ8WUM4 868 aaKnown RBP16.11■□□□□ 0.17
CLDN11-208ENST00000488989 RMDN1Q96DB5 314 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 MCCC1Q96RQ3 725 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-208ENST00000488989 SRPK1Q96SB4 655 aaKnown RBP16.11■□□□□ 0.17
CLDN11-208ENST00000488989 KIFC1Q9BW19 673 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 OSBPL6Q9BZF3 934 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 HACD3Q9P035 362 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 MUTYHQ9UIF7 546 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 SARDHQ9UL12 918 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 MMP17Q9ULZ9 603 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 SOX13Q9UN79 622 aa16.11■□□□□ 0.17
CLDN11-208ENST00000488989 ZNF106Q9H2Y7 1883 aaKnown RBP16.1■□□□□ 0.17
CLDN11-208ENST00000488989 C1QTNF3-AMACRE9PGA6 284 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 SYNCRIPO60506 623 aaKnown RBP16.1■□□□□ 0.17
CLDN11-208ENST00000488989 HOXB2P14652 356 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 TPH1P17752 444 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 ADRA1DP25100 572 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 PSMA3P25788 255 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 ITGB7P26010 798 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 COPAP53621 1224 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 PMS2P54278 862 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 POLR2LP62875 67 aaKnown RBP16.1■□□□□ 0.17
CLDN11-208ENST00000488989 ZXDAP98168 799 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 MTM1Q13496 603 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 STARD3Q14849 445 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 TJAP1Q5JTD0 557 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 STEAP4Q687X5 459 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 TMEM135Q86UB9 458 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 SIX5Q8N196 739 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 FBXO36Q8NEA4 188 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 RPLP0P6Q8NHW5 317 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 BRSK1Q8TDC3 778 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 PYROXD1Q8WU10 500 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 STAMBPL1Q96FJ0 436 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 TTC25Q96NG3 672 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 EPB41L4BQ9H329 900 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 SEMA4AQ9H3S1 761 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 TRABDQ9H4I3 376 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 LMAN1LQ9HAT1 526 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 MAGEE1Q9HCI5 957 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 ARFGAP3Q9NP61 516 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 NINJ2Q9NZG7 142 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 RIMKLBQ9ULI2 386 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 CHMP2BQ9UQN3 213 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 TCAF1Q9Y4C2 921 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 LRRK1Q38SD2 2015 aa16.1■□□□□ 0.17
CLDN11-208ENST00000488989 NCOR1O75376 2440 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 FAM237BA0A1B0GVD1 139 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 MROH6A6NGR9 719 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 CAPN8A6NHC0 703 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 PAPSS2O95340 614 aaPredicted RBP16.09■□□□□ 0.17
CLDN11-208ENST00000488989 TTC4O95801 387 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 GSTA2P09210 222 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 TIMP2P16035 220 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 COL9A1P20849 921 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 SLC8A1P32418 973 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 SUOXP51687 545 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 EPHB1P54762 984 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 CRADDP78560 199 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 SATB1Q01826 763 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 LAMB3Q13751 1172 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 POU6F1Q14863 301 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 UAP1Q16222 522 aaPredicted RBP16.09■□□□□ 0.17
CLDN11-208ENST00000488989 FAM46CQ5VWP2 391 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 KIAA1211LQ6NV74 962 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 PKN3Q6P5Z2 889 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 ANKMY2Q8IV38 441 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 NDUFAF2Q8N183 169 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 PEX13Q92968 403 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 ARRDC3Q96B67 414 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 SCRN2Q96FV2 425 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 PPP1R16AQ96I34 528 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 C9orf72Q96LT7 481 aa16.09■□□□□ 0.17
CLDN11-208ENST00000488989 C19orf43Q9BQ61 176 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms