RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MBNL1Q9NR56 388 aaKnown RBP16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 DDX56Q9NY93 547 aaKnown RBP16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 DOCK9Q9BZ29 2069 aa16.06■□□□□ 0.16
CTDSP1-209ENST00000488627 CFAP69A5D8W1 941 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 BTNL10A8MVZ5 291 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 PJA2O43164 708 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 PSTPIP1O43586 416 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 SOCS5O75159 536 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 TOP3BO95985 862 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 TNNT1P13805 278 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 CCNB1P14635 433 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 MX2P20592 715 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 IGFALSP35858 605 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 GRK6P43250 576 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 LIG3P49916 1009 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 PPIDQ08752 370 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 FZD2Q14332 565 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 AGERQ15109 404 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 WSCD2Q2TBF2 565 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 CFAP58Q5T655 872 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 TIGD7Q6NT04 549 aaPredicted RBP16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 SLCO6A1Q86UG4 719 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 DCP2Q8IU60 420 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 SLC25A45Q8N413 288 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 ACRBPQ8NEB7 543 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 ARRDC2Q8TBH0 407 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 OLFM3Q96PB7 478 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 LGMNQ99538 433 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 CDC6Q99741 560 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 RBM22Q9NW64 420 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 TOR4AQ9NXH8 423 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 COQ6Q9Y2Z9 468 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 PCDHB9Q9Y5E1 797 aa16.05■□□□□ 0.16
CTDSP1-209ENST00000488627 SPTY2D1-AS1A0A0U1RR47 76 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 FPGTO14772 594 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 APOL1O14791 398 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 DKK1O94907 266 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 PGLSO95336 258 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 ITGAVP06756 1048 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 C6P13671 934 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 GM2AP17900 193 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 RABIFP47224 123 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 MARCKSL1P49006 195 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 POLR2LP62875 67 aaKnown RBP16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 ADCY2Q08462 1091 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 NIPAL4Q0D2K0 466 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 ERAP2Q6P179 960 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 NPNTQ6UXI9 565 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 LIPIQ6XZB0 460 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 DPPA4Q7L190 304 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 PTAR1Q7Z6K3 402 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 CCDC13Q8IYE1 715 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 CBARPQ8N350 705 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 CNTD1Q8N815 330 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 KRT35Q92764 455 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 IFT43Q96FT9 208 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 SEMA3CQ99985 751 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 ANP32EQ9BTT0 268 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 MAK16Q9BXY0 300 aaKnown RBP16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 AMACRQ9UHK6 382 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 HEY1Q9Y5J3 304 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 TRPM6Q9BX84 2022 aa16.04■□□□□ 0.16
CTDSP1-209ENST00000488627 SPEGQ15772 3267 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 A0A1W2PQ67 120 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 KCNK1O00180 336 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 FZD6O60353 706 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 SDC3O75056 442 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 ATXN1LP0C7T5 689 aaKnown RBP16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 FTH1P19P0C7X4 201 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 KRT10P13645 584 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 ZFXP17010 805 aaPredicted RBP16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 VAV2P52735 878 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 DSC2Q02487 901 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 FAM182AQ5T1J6 154 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 SPOCD1Q6ZMY3 1216 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 RFX6Q8HWS3 928 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 KATNAL2Q8IYT4 538 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 CCNYQ8ND76 341 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 PIH1D2Q8WWB5 315 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 IL12RB2Q99665 862 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 C1QTNF7Q9BXJ2 289 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 POLR1EQ9GZS1 481 aaKnown RBP16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 B4GALT6Q9UBX8 382 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 KLF15Q9UIH9 416 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 PPIL1Q9Y3C6 166 aa16.03■□□□□ 0.16
CTDSP1-209ENST00000488627 A0A0U1RQJ8 604 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 A8MX80 341 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 TNFSF14O43557 240 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 RECQL5O94762 991 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 ZRANB2O95218 330 aaKnown RBP eCLIP16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 PRLP01236 227 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 JCHAINP01591 159 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 HLA-DQB2P05538 268 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 PDHA1P08559 390 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 GIMD1P0DJR0 217 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 CES1P23141 567 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 DGKAP23743 735 aa16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 IFI35P80217 286 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-209ENST00000488627 FOXC1Q12948 553 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms