RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 PNMA8BQ9ULN7 279 aaPredicted RBP22.78■■□□□ 1.24
PTPN4-211ENST00000488279 ATP8A1Q9Y2Q0 1164 aa22.78■■□□□ 1.24
PTPN4-211ENST00000488279 BZW2Q9Y6E2 419 aaKnown RBP22.78■■□□□ 1.24
PTPN4-211ENST00000488279 ANXA6P08133 673 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 HTR1BP28222 390 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 ACTN2P35609 894 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 RGRP47804 291 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 POLR2LP62875 67 aaKnown RBP22.77■■□□□ 1.24
PTPN4-211ENST00000488279 BCL2L1Q07817 233 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 DPYSQ14117 519 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 EFL1Q7Z2Z2 1120 aaKnown RBP22.77■■□□□ 1.24
PTPN4-211ENST00000488279 ZSWIM9Q86XI8 627 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 NPWQ8N729 165 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 PAF1Q8N7H5 531 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 FUCA2Q9BTY2 467 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.77■■□□□ 1.24
PTPN4-211ENST00000488279 LRRC61Q9BV99 259 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 BOCQ9BWV1 1114 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 PCDHB1Q9Y5F3 818 aa22.77■■□□□ 1.24
PTPN4-211ENST00000488279 EME2A4GXA9 379 aaPredicted RBP22.76■■□□□ 1.23
PTPN4-211ENST00000488279 H3BRJ5 948 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 YY2O15391 372 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 TSHRP16473 764 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 MMP12P39900 470 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 RENBPP51606 427 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 INPP5AQ14642 412 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 AGERQ15109 404 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 GUSBP11Q6P575 273 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 ARHGAP36Q6ZRI8 547 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 TPCN2Q8NHX9 752 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 SNIP1Q8TAD8 396 aaKnown RBP22.76■■□□□ 1.23
PTPN4-211ENST00000488279 SYN2Q92777 582 aaPredicted RBP22.76■■□□□ 1.23
PTPN4-211ENST00000488279 SEPT3Q9UH03 358 aa22.76■■□□□ 1.23
PTPN4-211ENST00000488279 CFAP69A5D8W1 941 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 USP12O75317 370 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 CSO75390 466 aaKnown RBP22.75■■□□□ 1.23
PTPN4-211ENST00000488279 PRKCGP05129 697 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 CTSEP14091 401 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 ARL4AP40617 200 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 SCNN1BP51168 640 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 FANCCQ00597 558 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 PIGHQ14442 188 aaPredicted RBP22.75■■□□□ 1.23
PTPN4-211ENST00000488279 ELOCQ15369 112 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 DPYSL2Q16555 572 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 TDRD12Q587J7 1177 aaKnown RBP22.75■■□□□ 1.23
PTPN4-211ENST00000488279 C6orf132Q5T0Z8 1188 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 HID1Q8IV36 788 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 LSMEM2Q8N112 164 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 FSTL5Q8N475 847 aaPredicted RBP22.75■■□□□ 1.23
PTPN4-211ENST00000488279 ATL2Q8NHH9 583 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 SCG3Q8WXD2 468 aaKnown RBP22.75■■□□□ 1.23
PTPN4-211ENST00000488279 ECHDC3Q96DC8 303 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 ZNF599Q96NL3 588 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 PSKH2Q96QS6 385 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 APOOQ9BUR5 198 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 CLPBQ9H078 707 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 DOLKQ9UPQ8 538 aa22.75■■□□□ 1.23
PTPN4-211ENST00000488279 A0A1W2PQJ5 194 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 MUSKO15146 869 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 TGM2P21980 687 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 IL1R2P27930 398 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 ITPKBP27987 946 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 HK3P52790 923 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 LBRQ14739 615 aaKnown RBP22.74■■□□□ 1.23
PTPN4-211ENST00000488279 NFATC4Q14934 902 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 SMTNL2Q2TAL5 461 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 TBC1D25Q3MII6 688 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 HGSNATQ68CP4 663 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 ESRP1Q6NXG1 681 aaKnown RBP22.74■■□□□ 1.23
PTPN4-211ENST00000488279 ENPP7Q6UWV6 458 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 POLNQ7Z5Q5 900 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 HSPH1Q92598 858 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 TSACCQ96A04 125 aaPredicted RBP22.74■■□□□ 1.23
PTPN4-211ENST00000488279 CBX8Q9HC52 389 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 OR1A2Q9Y585 309 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 MYLKQ15746 1914 aa22.74■■□□□ 1.23
PTPN4-211ENST00000488279 SYCE3A1L190 88 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 RASGRP1O95267 797 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 MPOP05164 745 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 PCCBP05166 539 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 ALPIP09923 528 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 UBASH3AP57075 661 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 AP1S1P61966 158 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 SLC10A7Q0GE19 358 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 SOWAHCQ53LP3 525 aaPredicted RBP22.73■■□□□ 1.23
PTPN4-211ENST00000488279 TMCO4Q5TGY1 634 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 LVRNQ6Q4G3 990 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 TMCO3Q6UWJ1 677 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 RD3Q7Z3Z2 195 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 LUZP1Q86V48 1076 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 TP53INP2Q8IXH6 220 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 SLC35F3Q8IY50 421 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 SDR16C5Q8N3Y7 309 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 NAT6Q93015 286 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 GRAMD1AQ96CP6 724 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 CRELD1Q96HD1 420 aa22.73■■□□□ 1.23
PTPN4-211ENST00000488279 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.73■■□□□ 1.23
PTPN4-211ENST00000488279 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.72■■□□□ 1.23
PTPN4-211ENST00000488279 TRAFD1O14545 582 aaPredicted RBP22.72■■□□□ 1.23
PTPN4-211ENST00000488279 RECQL5O94762 991 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms