RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 TSPAN6O43657 245 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 TMPRSS11DO60235 418 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 MGEA5O60502 916 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 PRDM1O75626 825 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 RNF8O76064 485 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 EPN2O95208 641 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 CXCL14O95715 111 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 TSPY3P0CV98 308 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 TSPY8P0CW00 308 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 CTSAP10619 480 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 TPH1P17752 444 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 ITGB6P18564 788 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 CSRP1P21291 193 aaKnown RBP5.1□□□□□ -1.59
BRCA1-217ENST00000487825 CD72P21854 359 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 PEX2P28328 305 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 CA8P35219 290 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 SLC16A2P36021 539 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 NR4A2P43354 598 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 CCR3P51677 355 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 CLCN4P51793 760 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 GHRHRQ02643 423 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 DEUP1Q05D60 604 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 SRSF5Q13243 272 aaKnown RBP5.1□□□□□ -1.59
BRCA1-217ENST00000487825 OS9Q13438 667 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-217ENST00000487825 SPTAN1Q13813 2472 aaKnown RBP5.1□□□□□ -1.59
BRCA1-217ENST00000487825 GRM3Q14832 879 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 POLD3Q15054 466 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-217ENST00000487825 CCDC96Q2M329 555 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 RANBP10Q6VN20 620 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 UNC13DQ70J99 1090 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 SLC24A5Q71RS6 500 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 YAF2Q8IY57 180 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 DNAJB3Q8WWF6 145 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 RMDN3Q96TC7 470 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 TMEM117Q9H0C3 514 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 ARRDC1-AS1Q9H2J1 176 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 TMEM161AQ9NX61 479 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 NKX1-2Q9UD57 310 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-217ENST00000487825 TUBE1Q9UJT0 475 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 KLK13Q9UKR3 277 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 ZNF215Q9UL58 517 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-217ENST00000487825 TRPV2Q9Y5S1 764 aa5.1□□□□□ -1.59
BRCA1-217ENST00000487825 DOPEY2Q9Y3R5 2298 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 ATG2BQ96BY7 2078 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 MYH9P35579 1960 aaKnown RBP5.09□□□□□ -1.59
BRCA1-217ENST00000487825 THADAQ6YHU6 1953 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 TDRD15B5MCY1 1934 aaKnown RBP5.09□□□□□ -1.59
BRCA1-217ENST00000487825 KDM3AQ9Y4C1 1321 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 SHISA7A6NL88 538 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 GOLIM4O00461 696 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 KRT38O76015 456 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 TGFB3P10600 412 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 BTF3P20290 206 aaKnown RBP5.09□□□□□ -1.59
BRCA1-217ENST00000487825 HOXD9P28356 352 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-217ENST00000487825 MCM5P33992 734 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 POLGP54098 1239 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-217ENST00000487825 LARS2Q15031 903 aaKnown RBP5.09□□□□□ -1.59
BRCA1-217ENST00000487825 SEC23BQ15437 767 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 ALDH1L2Q3SY69 923 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 C4orf46Q504U0 113 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 MARCH8Q5T0T0 291 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 ARHGEF16Q5VV41 709 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 PLAG1Q6DJT9 500 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 SHC4Q6S5L8 630 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 CLEC9AQ6UXN8 241 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 TPRG1Q6ZUI0 275 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 SRGAP1Q7Z6B7 1085 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 LONP2Q86WA8 852 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 VPS52Q8N1B4 723 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 MYO1HQ8N1T3 1032 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 LINC01465Q8N7H1 131 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 ZNF398Q8TD17 642 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 FGF14Q92915 247 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 HMCESQ96FZ2 354 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 CASD1Q96PB1 797 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 HIST1H2AAQ96QV6 131 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 RPP25Q9BUL9 199 aaKnown RBP5.09□□□□□ -1.59
BRCA1-217ENST00000487825 ELAC1Q9H777 363 aaKnown RBP5.09□□□□□ -1.59
BRCA1-217ENST00000487825 WDR26Q9H7D7 661 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 MLXIPQ9HAP2 919 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 PXMP2Q9NR77 195 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 RGS18Q9NS28 235 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 TBC1D23Q9NUY8 699 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 DKK4Q9UBT3 224 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 RIMKLBQ9ULI2 386 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 STX8Q9UNK0 236 aa5.09□□□□□ -1.59
BRCA1-217ENST00000487825 ADAMTS9Q9P2N4 1935 aa5.09□□□□□ -1.6
BRCA1-217ENST00000487825 KIAA1549LQ6ZVL6 1849 aa5.09□□□□□ -1.6
BRCA1-217ENST00000487825 AQP7P3A6NL99 342 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 M0QZ92 97 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 CLIC1O00299 241 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 INPPL1O15357 1258 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 SURF6O75683 361 aaKnown RBP5.08□□□□□ -1.6
BRCA1-217ENST00000487825 PAPSS2O95340 614 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-217ENST00000487825 ZBED1O96006 694 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 NOVP48745 357 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 CARSP49589 748 aaKnown RBP5.08□□□□□ -1.6
BRCA1-217ENST00000487825 TFAP4Q01664 338 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 ZNF91Q05481 1191 aa5.08□□□□□ -1.6
BRCA1-217ENST00000487825 PPFIA1Q13136 1202 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms