RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 HORMAD1Q86X24 394 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 SPATS2Q86XZ4 545 aaKnown RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 CAMK1DQ8IU85 385 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 TMEM139Q8IV31 216 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 RHOT2Q8IXI1 618 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 ATPAF2Q8N5M1 289 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 SPC24Q8NBT2 197 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 TMEM145Q8NBT3 493 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 KCTD6Q8NC69 237 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 ACRBPQ8NEB7 543 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 CASKIN2Q8WXE0 1202 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 FAF2Q96CS3 445 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 PPP1R16AQ96I34 528 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 CINPQ9BW66 212 aaPredicted RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 RCOR3Q9P2K3 495 aaPredicted RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 INTUQ9ULD6 942 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 BTBD3Q9Y2F9 522 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 PCDHA13Q9Y5I0 950 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 LRP4O75096 1905 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 MAP1BP46821 2468 aaKnown RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 PTPRBP23467 1997 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 SPAARA0A1B0GVQ0 90 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 IGLON5A6NGN9 336 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 AREL1O15033 823 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 AP1G1O43747 822 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 SH3BP5O60239 455 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 NDUFA10O95299 355 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 CER1O95813 267 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 KRT1P04264 644 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 KRT7P08729 469 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 KDELR1P24390 212 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 CD38P28907 300 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 GARSP41250 739 aaKnown RBP7.23□□□□□ -1.25
UBE4B-209ENST00000487244 ARHGAP25P42331 645 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 MAGEA1P43355 309 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 NXPH1P58417 271 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 MAXP61244 160 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 GALNT2Q10471 571 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 SLC10A2Q12908 348 aaPredicted RBP7.23□□□□□ -1.25
UBE4B-209ENST00000487244 IHHQ14623 411 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 LBRQ14739 615 aaKnown RBP7.23□□□□□ -1.25
UBE4B-209ENST00000487244 PAFAH1B3Q15102 231 aaKnown RBP7.23□□□□□ -1.25
UBE4B-209ENST00000487244 PDK2Q15119 407 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 TCEAL1Q15170 157 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 LLGL1Q15334 1064 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 SHBQ15464 509 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 SETMARQ53H47 684 aaPredicted RBP7.23□□□□□ -1.25
UBE4B-209ENST00000487244 TPRG1LQ5T0D9 272 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 ZFYVE27Q5T4F4 411 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 N4BP2L1Q5TBK1 243 aaPredicted RBP7.23□□□□□ -1.25
UBE4B-209ENST00000487244 TMCO4Q5TGY1 634 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 TMEM214Q6NUQ4 689 aaKnown RBP7.23□□□□□ -1.25
UBE4B-209ENST00000487244 GCNT7Q6ZNI0 430 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 B4GALNT4Q76KP1 1039 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 SRLQ86TD4 932 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 PRPF39Q86UA1 669 aaKnown RBP7.23□□□□□ -1.25
UBE4B-209ENST00000487244 NAXDQ8IW45 347 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 CCDC170Q8IYT3 715 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 LZTR1Q8N653 840 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 PLD5Q8N7P1 536 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 LRIG1Q96JA1 1093 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 ZNF670Q9BS34 389 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 DESI2Q9BSY9 194 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 WRAP53Q9BUR4 548 aaKnown RBP7.23□□□□□ -1.25
UBE4B-209ENST00000487244 OSBPL1AQ9BXW6 950 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 CPEB1Q9BZB8 566 aaKnown RBP7.23□□□□□ -1.25
UBE4B-209ENST00000487244 ZDHHC5Q9C0B5 715 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 LACRTQ9GZZ8 138 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 ETNK1Q9HBU6 452 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 TM7SF3Q9NS93 570 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 DONSONQ9NYP3 566 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 DUSP10Q9Y6W6 482 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 IGF2RP11717 2491 aa7.23□□□□□ -1.25
UBE4B-209ENST00000487244 TSPAN11A1L157 253 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 CDC14CA4D256 554 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 POM121BA6NF01 834 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 UPK3BL1B0FP48 263 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 UPK3BL2E5RIL1 263 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 PRAMEF26H0Y7S4 382 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 TLR4O00206 839 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 NEMP1O14524 444 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 SPOPO43791 374 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 MMP20O60882 483 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 TOP3BO95985 862 aaKnown RBP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 PAK4O96013 591 aaPredicted RBP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 CR2P20023 1033 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 CSRP1P21291 193 aaKnown RBP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 HNRNPA2B1P22626 353 aaKnown RBP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 CDC25BP30305 580 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 SERPINB6P35237 376 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 CYLC1P35663 651 aaPredicted RBP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 NOP2P46087 812 aaKnown RBP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 SCNN1BP51168 640 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 HADHBP55084 474 aaKnown RBP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 GDF10P55107 478 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 C21orf59P57076 290 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 RPS21P63220 83 aaKnown RBP7.22□□□□□ -1.25
UBE4B-209ENST00000487244 ADCY2Q08462 1091 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 ZNF235Q14590 738 aa7.22□□□□□ -1.25
UBE4B-209ENST00000487244 PTPRRQ15256 657 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms