RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 EXOC2Q96KP1 924 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 ARHGAP9Q9BRR9 750 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 TUBGCP2Q9BSJ2 902 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 STARD5Q9NSY2 213 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 LHX3Q9UBR4 397 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 IL17BQ9UHF5 180 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 HECTD1Q9ULT8 2610 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 LRP4O75096 1905 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 AGRPO00253 132 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 NFKB2Q00653 900 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 FAM114A1Q8IWE2 563 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 RTL3Q8N8U3 475 aaKnown RBP19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 Q8N9G6 341 aaPredicted RBP19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 MLKLQ8NB16 471 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 FAM172AQ8WUF8 416 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 CENPIQ92674 756 aaPredicted RBP19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 NTAN1Q96AB6 310 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 HMCESQ96FZ2 354 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 WDR92Q96MX6 357 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 RBM15Q96T37 977 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 NCAPGQ9BPX3 1015 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 PCDH12Q9NPG4 1184 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 NOCTQ9UK39 431 aaKnown RBP19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 APPL1Q9UKG1 709 aa19.61■□□□□ 0.73
SMPDL3A-202ENST00000487215 PRAMEF33A0A0G2JMD5 474 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 TSPAN11A1L157 253 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 TERTO14746 1132 aaKnown RBP19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 PRAMEF10O60809 474 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 TNFP01375 233 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 CYP1A1P04798 512 aaPredicted RBP19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 PCCBP05166 539 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 FAM87AP0C7U9 286 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 ITGB6P18564 788 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 ETV5P41161 510 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 ZFP36L1Q07352 338 aaKnown RBP19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 UGP2Q16851 508 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 HSP90AA4PQ58FG1 418 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 VASH2Q86V25 355 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 PYROXD2Q8N2H3 581 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 ATL2Q8NHH9 583 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 C11orf70Q9BRQ4 267 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 STK33Q9BYT3 514 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 DAAM1Q9Y4D1 1078 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 PCDHGA4Q9Y5G9 962 aa19.6■□□□□ 0.73
SMPDL3A-202ENST00000487215 RASA4BC9J798 803 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 RASA4O43374 803 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 GLB1P16278 677 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 EPHB2P29323 1055 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 LIG3P49916 1009 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 MTM1Q13496 603 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 AGERQ15109 404 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 CYTH1Q15438 398 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 MANEAQ5SRI9 462 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 CERCAMQ5T4B2 595 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 OGFOD3Q6PK18 319 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 ZFAND4Q86XD8 727 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 ZNF677Q86XU0 584 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 SFTPA2Q8IWL1 248 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 SLC30A5Q8TAD4 765 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 HCAR2Q8TDS4 363 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 OR1E3Q8WZA6 343 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 TMEM159Q96B96 161 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 SUV39H2Q9H5I1 410 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 FOXJ2Q9P0K8 574 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 SEPT10Q9P0V9 454 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 DGKBQ9Y6T7 804 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 SCN8AQ9UQD0 1980 aa19.59■□□□□ 0.73
SMPDL3A-202ENST00000487215 PES1O00541 588 aaKnown RBP19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 WT1P19544 449 aaPredicted RBP19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 MMP12P39900 470 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 YBEYP58557 167 aaPredicted RBP19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 FMO1Q01740 532 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 CDR2Q01850 454 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 SERINC3Q13530 473 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 ERAP2Q6P179 960 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 ATG14Q6ZNE5 492 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 SPRED1Q7Z699 444 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 SLFN11Q7Z7L1 901 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 ZSWIM9Q86XI8 627 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 DNAAF5Q86Y56 855 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 PLA2G15Q8NCC3 412 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 USP7Q93009 1102 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 CMKLR1Q99788 373 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 FGF22Q9HCT0 170 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 RNF215Q9Y6U7 377 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 BOD1L1Q8NFC6 3051 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 LRRK1Q38SD2 2015 aa19.58■□□□□ 0.72
SMPDL3A-202ENST00000487215 TMEM202A6NGA9 273 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 C9orf172C9J069 976 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 GFPT2O94808 682 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 PRKCGP05129 697 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 PNLIPP16233 465 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 CHRNB2P17787 502 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 MAPK10P53779 464 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 PTP4A2Q12974 167 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 TBR1Q16650 682 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 PARP15Q460N3 678 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 C14orf28Q4W4Y0 310 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 TMPRSS9Q7Z410 1059 aa19.57■□□□□ 0.72
SMPDL3A-202ENST00000487215 TAF8Q7Z7C8 310 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms