RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 GRIA4P48058 902 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 KPNA2P52292 529 aaKnown RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 ZNF140P52738 457 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 SLC5A9Q2M3M2 681 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 TSNAXIP1Q2TAA8 658 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 TAF1BQ53T94 588 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 ZNF470Q6ECI4 717 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 FOXR1Q6PIV2 292 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 TMEM184AQ6ZMB5 413 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 KDELC2Q7Z4H8 507 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 CILP2Q8IUL8 1156 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 NUDCD3Q8IVD9 361 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 PCDH20Q8N6Y1 951 aaKnown RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 GBP7Q8N8V2 638 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 HDAC10Q969S8 669 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 CPEB1Q9BZB8 566 aaKnown RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 RABEP2Q9H5N1 569 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 TLE6Q9H808 572 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 INTS10Q9NVR2 710 aaKnown RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 KLHL14Q9P2G3 628 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 SLC17A6Q9P2U8 582 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 GGT7Q9UJ14 662 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 MSRAQ9UJ68 235 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 INTS6Q9UL03 887 aaKnown RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 CHKBQ9Y259 395 aa11.69□□□□□ -0.54
PRKCB-207ENST00000486868 MRPS23Q9Y3D9 190 aaKnown RBP11.69□□□□□ -0.54
PRKCB-207ENST00000486868 FAM95CA0A1B0GW59 222 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 CCDC189A1A4V9 331 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 PFDN6O15212 129 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 PGLSO95336 258 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 GLP2RO95838 553 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 ATP5BP06576 529 aaKnown RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 TROVE2P10155 538 aaKnown RBP eCLIP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 STMN1P16949 149 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 CD9P21926 228 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 LPOP22079 712 aaPredicted RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 GRK2P25098 689 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 PTPN5P54829 565 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 RAB10P61026 200 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 SNRPD1P62314 119 aaKnown RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 PPARDQ03181 441 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 TRAF2Q12933 501 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 USP10Q14694 798 aaKnown RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 TYSND1Q2T9J0 566 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 PITRM1Q5JRX3 1037 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 SPDYAQ5MJ70 313 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 ARMC12Q5T9G4 340 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 N4BP2L1Q5TBK1 243 aaPredicted RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 AFTPHQ6ULP2 937 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 GRASPQ7Z6J2 395 aaPredicted RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 SDCCAG8Q86SQ7 713 aaPredicted RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 ARID3BQ8IVW6 561 aaPredicted RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 ADGRG2Q8IZP9 1017 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 APCDD1Q8J025 514 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 ARMC2Q8NEN0 867 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 WFIKKN2Q8TEU8 576 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 SREK1Q8WXA9 508 aaKnown RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 SMG7Q92540 1137 aaKnown RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 E2F7Q96AV8 911 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 RMDN1Q96DB5 314 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 CDKN2AIPNLQ96HQ2 116 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 NSMCE3Q96MG7 304 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 TSNARE1Q96NA8 513 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 LYSMD1Q96S90 227 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 SIKE1Q9BRV8 207 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 TSSK1BQ9BXA7 367 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 KDM4CQ9H3R0 1056 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 TRPV4Q9HBA0 871 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 POPDC3Q9HBV1 291 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 IL1RAPL1Q9NZN1 696 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 EMCNQ9ULC0 261 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 CCL26Q9Y258 94 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 YBX2Q9Y2T7 364 aaKnown RBP11.68□□□□□ -0.54
PRKCB-207ENST00000486868 PPIL1Q9Y3C6 166 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 ACTL7AQ9Y615 435 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 OBSL1O75147 1896 aa11.68□□□□□ -0.54
PRKCB-207ENST00000486868 DENND4CQ5VZ89 1909 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 TTC24A2A3L6 582 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 CCT8L1PA6NM43 557 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 GRXCR1A8MXD5 290 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 WASH3PC4AMC7 463 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 TRAFD1O14545 582 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 HOXC11O43248 304 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 SNNO75324 88 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 KIAA0754O94854 1291 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 SNUPNO95149 360 aaKnown RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 S1PR4O95977 384 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 PRKCGP05129 697 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 PABPC1P11940 636 aaKnown RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 CEBPBP17676 345 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 HLA-FP30511 346 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 CD70P32970 193 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 ARSDP51689 593 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 BCL2L1Q07817 233 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 CCDC15Q0P6D6 951 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 CTBP1Q13363 440 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 GALNT3Q14435 633 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 LACTB2Q53H82 288 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 RNF187Q5TA31 235 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 FAM109BQ6ICB4 259 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms