RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SLC14A2Q15849 920 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 RNASEH2BQ5TBB1 312 aaKnown RBP12.88□□□□□ -0.35
HDAC6-229ENST00000486665 NAT8LQ8N9F0 302 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 PIP4K2CQ8TBX8 421 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 ARRDC3Q96B67 414 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 SMIM14Q96QK8 99 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 TUBGCP5Q96RT8 1024 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 TRIB3Q96RU7 358 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 APOL2Q9BQE5 337 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 RTKNQ9BST9 563 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 IER2Q9BTL4 223 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 FICDQ9BVA6 458 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 TDRD1Q9BXT4 1180 aaKnown RBP12.88□□□□□ -0.35
HDAC6-229ENST00000486665 MKRN2Q9H000 416 aaKnown RBP12.88□□□□□ -0.35
HDAC6-229ENST00000486665 EPB41L5Q9HCM4 733 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 VPS45Q9NRW7 570 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 SEMA4GQ9NTN9 838 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 GRHL1Q9NZI5 618 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 UTP11Q9Y3A2 253 aaKnown RBP12.88□□□□□ -0.35
HDAC6-229ENST00000486665 SPAG17Q6Q759 2223 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 CNOT1A5YKK6 2376 aaKnown RBP12.87□□□□□ -0.35
HDAC6-229ENST00000486665 E7EVH7 732 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PLK4O00444 970 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PSMD3O43242 534 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 TMEM63AO94886 807 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 SUN1O94901 812 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 SEC31AO94979 1220 aaKnown RBP12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PGLSO95336 258 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PAPSS2O95340 614 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PRNPP04156 253 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 APRTP07741 180 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 ATXN1LP0C7T5 689 aaKnown RBP12.87□□□□□ -0.35
HDAC6-229ENST00000486665 TIMP2P16035 220 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 ITIH2P19823 946 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 TPSB2P20231 275 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 SERPINA4P29622 427 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 SLC8A1P32418 973 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 CHRNA4P43681 627 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PSMD8P48556 350 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 LMAN1P49257 510 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 ITGA8P53708 1063 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 DRG2P55039 364 aaKnown RBP12.87□□□□□ -0.35
HDAC6-229ENST00000486665 CDK18Q07002 472 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 NAA30Q147X3 362 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PTPRRQ15256 657 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 TPSAB1Q15661 275 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 DENND5AQ6IQ26 1287 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 HIBCHQ6NVY1 386 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-229ENST00000486665 RANBP10Q6VN20 620 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PRR23CQ6ZRP0 262 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 CACUL1Q86Y37 369 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 TMPRSS6Q8IU80 811 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 SLC25A41Q8N5S1 370 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PDCD6IPQ8WUM4 868 aaKnown RBP12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PIH1D2Q8WWB5 315 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 SEC14L1Q92503 715 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 ECHDC3Q96DC8 303 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 SNF8Q96H20 258 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 LRIG1Q96JA1 1093 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 FEM1CQ96JP0 617 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 ZNF641Q96N77 438 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PPP1R2P1Q96PQ5 205 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 TBL1YQ9BQ87 522 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 OSBPL1AQ9BXW6 950 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 RAB17Q9H0T7 212 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 ANAPC5Q9UJX4 755 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 RAB23Q9ULC3 237 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 PCDHB9Q9Y5E1 797 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 CFAP47Q6ZTR5 3102 aa12.87□□□□□ -0.35
HDAC6-229ENST00000486665 TCRBV21S2A2A0A5A6 115 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 C16orf96A6NNT2 1141 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 GOLGA8MH3BSY2 632 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 KPNA3O00505 521 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-229ENST00000486665 SLC30A4O14863 429 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 MID1O15344 667 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 RNASEH1O60930 286 aaKnown RBP12.86□□□□□ -0.35
HDAC6-229ENST00000486665 SOCS5O75159 536 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 EPOP01588 193 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 PRKCGP05129 697 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 ADRB1P08588 477 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 C7P10643 843 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 GABRG2P18507 467 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 NDUFV2P19404 249 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 SDHBP21912 280 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 PXNP49023 591 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-229ENST00000486665 DGKEP52429 567 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 GALNT3Q14435 633 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 GRM3Q14832 879 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 CST6Q15828 149 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 CCDC6Q16204 474 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 QPCTQ16769 361 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 ZNF805Q5CZA5 627 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 PPM1JQ5JR12 505 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 SIRPB2Q5JXA9 342 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 ARMC12Q5T9G4 340 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 ZNF776Q68DI1 518 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-229ENST00000486665 ZDHHC24Q6UX98 284 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 ZNF534Q76KX8 674 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 PCGF5Q86SE9 256 aa12.86□□□□□ -0.35
HDAC6-229ENST00000486665 DSG4Q86SJ6 1040 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms