RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 WBP2Q969T9 261 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 ZFRQ96KR1 1074 aaKnown RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 GPR78Q96P69 363 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 GATA5Q9BWX5 397 aaPredicted RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 ARMCX1Q9P291 453 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 XPR1Q9UBH6 696 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 ACTL7AQ9Y615 435 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 ANKRD36A6QL64 1941 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 TARM1B6A8C7 271 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 INSIG1O15503 277 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 TSPAN3O60637 253 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 FGBP02675 491 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 F11P03951 625 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 LINC00271P0C7V0 271 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 CR2P20023 1033 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 ARSDP51689 593 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 PGGT1BP53609 377 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 HTRA4P83105 476 aaPredicted RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 SMAD3P84022 425 aaKnown RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 PABPC1LQ4VXU2 614 aaKnown RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 RBM20Q5T481 1227 aaKnown RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 CXorf57Q6NSI4 855 aaKnown RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 LONP2Q86WA8 852 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 BADQ92934 168 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 NXNL1Q96CM4 212 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 BTBD10Q9BSF8 475 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 MUC3BQ9H195 1237 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 MRPL46Q9H2W6 279 aaKnown RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 APOBEC2Q9Y235 224 aaKnown RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 ARIH1Q9Y4X5 557 aaPredicted RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 BPTFQ12830 3046 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 CHUKO15111 745 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 LILRB3O75022 631 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 MYL4P12829 197 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 NSUN2Q08J23 767 aaKnown RBP eCLIP20.46■□□□□ 0.87
HPS3-206ENST00000486530 ASPHQ12797 758 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 DLG1Q12959 904 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 PPIGQ13427 754 aaKnown RBP eCLIP20.46■□□□□ 0.87
HPS3-206ENST00000486530 TUBB3Q13509 450 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 ZNF789Q5FWF6 425 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 RNF219Q5W0B1 726 aaPredicted RBP20.46■□□□□ 0.87
HPS3-206ENST00000486530 TTC8Q8TAM2 541 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 MRPL57Q9BQC6 102 aaKnown RBP20.46■□□□□ 0.87
HPS3-206ENST00000486530 CDH19Q9H159 772 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 TRPC7Q9HCX4 862 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 ZNF334Q9HCZ1 680 aaPredicted RBP20.46■□□□□ 0.87
HPS3-206ENST00000486530 SCUBE2Q9NQ36 999 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 SMPD4Q9NXE4 827 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 KCTD3Q9Y597 815 aa20.46■□□□□ 0.87
HPS3-206ENST00000486530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.45■□□□□ 0.86
HPS3-206ENST00000486530 ZBBXA8MT70 800 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 CBX4O00257 560 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 TEX28O15482 410 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 RPP40O75818 363 aaKnown RBP20.45■□□□□ 0.86
HPS3-206ENST00000486530 WFS1O76024 890 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 OLFM2O95897 454 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 RGRP47804 291 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 HK2P52789 917 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 ALDH18A1P54886 795 aaKnown RBP20.45■□□□□ 0.86
HPS3-206ENST00000486530 MAVSQ7Z434 540 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 GPR150Q8NGU9 434 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 SCG3Q8WXD2 468 aaKnown RBP20.45■□□□□ 0.86
HPS3-206ENST00000486530 NDNQ99608 321 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 CCDC106Q9BWC9 280 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 DRC3Q9H069 523 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 ASB3Q9Y575 518 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 ARL5AQ9Y689 179 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 TYW5A2RUC4 315 aaKnown RBP20.45■□□□□ 0.86
HPS3-206ENST00000486530 A8MUI8 341 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 ZNF195O14628 629 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 GLP2RO95838 553 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 S1PR4O95977 384 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 C1RP00736 705 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 IDH3AP50213 366 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 SCNN1BP51168 640 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 RCN2Q14257 317 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 CYTH1Q15438 398 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 FAM83EQ2M2I3 478 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 HECTD2Q5U5R9 776 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 ZNF781Q8N8C0 355 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 HJURPQ8NCD3 748 aaPredicted RBP20.45■□□□□ 0.86
HPS3-206ENST00000486530 DNAJC1Q96KC8 554 aaKnown RBP20.45■□□□□ 0.86
HPS3-206ENST00000486530 TBATAQ96M53 351 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 NUDCD1Q96RS6 583 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 OLFM1Q99784 485 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 MIPEPQ99797 713 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 IL21Q9HBE4 155 aa20.45■□□□□ 0.86
HPS3-206ENST00000486530 CORO1CQ9ULV4 474 aaPredicted RBP20.45■□□□□ 0.86
HPS3-206ENST00000486530 RPL26L1Q9UNX3 145 aaKnown RBP20.45■□□□□ 0.86
HPS3-206ENST00000486530 CCL22O00626 93 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 CRTAMO95727 393 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 SLC8A1P32418 973 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 GRIA4P48058 902 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 AGAP9Q5VTM2 703 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 MRNIPQ6NTE8 343 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 TREML1Q86YW5 311 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 HEXDCQ8WVB3 486 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 TDRD1Q9BXT4 1180 aaKnown RBP20.44■□□□□ 0.86
HPS3-206ENST00000486530 ILKAPQ9H0C8 392 aaPredicted RBP20.44■□□□□ 0.86
HPS3-206ENST00000486530 IGSF5Q9NSI5 407 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms