RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 APLFQ8IW19 511 aaPredicted RBP8.35□□□□□ -1.07
XRN1-212ENST00000486211 TP53I13Q8NBR0 393 aaPredicted RBP8.35□□□□□ -1.07
XRN1-212ENST00000486211 UBA3Q8TBC4 463 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 GTPBP3Q969Y2 492 aaKnown RBP8.35□□□□□ -1.07
XRN1-212ENST00000486211 VOPP1Q96AW1 172 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 CLIC6Q96NY7 704 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 TEFMQ96QE5 360 aaKnown RBP8.35□□□□□ -1.07
XRN1-212ENST00000486211 DNAI2Q9GZS0 605 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 TNKS2Q9H2K2 1166 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 MLXIPLQ9NP71 852 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 CISHQ9NSE2 258 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 VPS28Q9UK41 221 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 PHTF1Q9UMS5 762 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 POLHQ9Y253 713 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 PIK3R2O00459 728 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 EIF5BO60841 1220 aaKnown RBP8.34□□□□□ -1.07
XRN1-212ENST00000486211 IGLV3-25P01717 112 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 CSTF2P33240 577 aaKnown RBP eCLIP8.34□□□□□ -1.07
XRN1-212ENST00000486211 PEX5P50542 639 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 SRP54P61011 504 aaKnown RBP8.34□□□□□ -1.07
XRN1-212ENST00000486211 EIF4EBP2Q13542 120 aaPredicted RBP8.34□□□□□ -1.07
XRN1-212ENST00000486211 KNOP1Q1ED39 458 aaKnown RBP8.34□□□□□ -1.07
XRN1-212ENST00000486211 TTC39BQ5VTQ0 682 aaPredicted RBP8.34□□□□□ -1.07
XRN1-212ENST00000486211 PAPD7Q5XG87 772 aaKnown RBP8.34□□□□□ -1.07
XRN1-212ENST00000486211 CEP135Q66GS9 1140 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 SPECC1LQ69YQ0 1117 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 FBXL22Q6P050 247 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 RD3Q7Z3Z2 195 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 ATP11CQ8NB49 1132 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 FAM46DQ8NEK8 389 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 OR4D9Q8NGE8 314 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 TMEM174Q8WUU8 243 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 C19orf60Q96EN9 201 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 PDXPQ96GD0 296 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 BTN2A3PQ96KV6 586 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 RANBP9Q96S59 729 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 PPP1R9BQ96SB3 815 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 CTRCQ99895 268 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 PANK2Q9BZ23 570 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 IMPG2Q9BZV3 1241 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 GRIP2Q9C0E4 1043 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 TMEM9Q9P0T7 183 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 LUZP4Q9P127 313 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 VPS51Q9UID3 782 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 TBC1D30Q9Y2I9 924 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 DGKBQ9Y6T7 804 aa8.34□□□□□ -1.07
XRN1-212ENST00000486211 PRRC2CQ9Y520 2896 aaKnown RBP8.34□□□□□ -1.07
XRN1-212ENST00000486211 HEATR9A2RTY3 570 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 KCNU1A8MYU2 1149 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 B4DGG1 531 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 O00370 1275 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 AREL1O15033 823 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 KRT86O43790 486 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 STK17BO94768 372 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 APOEP02649 317 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 SETSIPP0DME0 302 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 BMP6P22004 513 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 MPSTP25325 297 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 ALDH4A1P30038 563 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 RGS7P49802 495 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 PGDP52209 483 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 MAZP56270 477 aaKnown RBP8.33□□□□□ -1.08
XRN1-212ENST00000486211 NUCB2P80303 420 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 MC2RQ01718 297 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 PPP3CAQ08209 521 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 SQSTM1Q13501 440 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 SEMA5AQ13591 1074 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 ERV3-1Q14264 604 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 NFATC4Q14934 902 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 IRF4Q15306 451 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 SYPL2Q5VXT5 272 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 JMJD6Q6NYC1 403 aaPredicted RBP8.33□□□□□ -1.08
XRN1-212ENST00000486211 PMF1Q6P1K2 205 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 CNNM4Q6P4Q7 775 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 FOXR2Q6PJQ5 311 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 ENPP7Q6UWV6 458 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 KDELC2Q7Z4H8 507 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 FAM129CQ86XR2 697 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 SLC9A9Q8IVB4 645 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 FAM186BQ8IYM0 893 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 NRSN1Q8IZ57 195 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 SLC35F5Q8WV83 523 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 RAB7BQ96AH8 199 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 ZSCAN31Q96LW9 406 aaPredicted RBP8.33□□□□□ -1.08
XRN1-212ENST00000486211 TNMDQ9H2S6 317 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 TRIT1Q9H3H1 467 aaKnown RBP8.33□□□□□ -1.08
XRN1-212ENST00000486211 KBTBD4Q9NVX7 518 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 RRN3Q9NYV6 651 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 RCOR3Q9P2K3 495 aaPredicted RBP8.33□□□□□ -1.08
XRN1-212ENST00000486211 PCDHGA9Q9Y5G4 932 aaKnown RBP8.33□□□□□ -1.08
XRN1-212ENST00000486211 SRPRBQ9Y5M8 271 aaKnown RBP8.33□□□□□ -1.08
XRN1-212ENST00000486211 RPS6KL1Q9Y6S9 549 aa8.33□□□□□ -1.08
XRN1-212ENST00000486211 POLEQ07864 2286 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 NIPBLQ6KC79 2804 aaeCLIP8.32□□□□□ -1.08
XRN1-212ENST00000486211 C16orf96A6NNT2 1141 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 TMEM110-MUSTN1A8MSY1 372 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 NEMP1O14524 444 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 MSTNO14793 375 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 MMP20O60882 483 aa8.32□□□□□ -1.08
XRN1-212ENST00000486211 ENDOD1O94919 500 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms