RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 UBL4BQ8N7F7 174 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 OR2I1PQ8NGU4 316 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 CXorf40AQ8TE69 158 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 LRRN4Q8WUT4 740 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 ASB12Q8WXK4 309 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 P3H4Q92791 437 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 ECHDC3Q96DC8 303 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 SEMA3CQ99985 751 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 C1QTNF7Q9BXJ2 289 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 POLR1EQ9GZS1 481 aaKnown RBP12.55□□□□□ -0.4
HMG20B-211ENST00000486028 GAREM1Q9H706 876 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 EFR3BQ9Y2G0 817 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 ATP8A1Q9Y2Q0 1164 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 PCDHGC4Q9Y5F7 938 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 SNX11Q9Y5W9 270 aa12.55□□□□□ -0.4
HMG20B-211ENST00000486028 CNOT1A5YKK6 2376 aaKnown RBP12.54□□□□□ -0.4
HMG20B-211ENST00000486028 DCDC2BA2VCK2 349 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 MIF4GDA9UHW6 222 aaKnown RBP12.54□□□□□ -0.4
HMG20B-211ENST00000486028 KCNK1O00180 336 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 TRAFD1O14545 582 aaPredicted RBP12.54□□□□□ -0.4
HMG20B-211ENST00000486028 TM4SF5O14894 197 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 SPINT1O43278 529 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 HTRA2O43464 458 aaPredicted RBP12.54□□□□□ -0.4
HMG20B-211ENST00000486028 MMP20O60882 483 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 WNT1P04628 370 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 CCDC175P0C221 793 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 ITIH2P19823 946 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 NFKBIAP25963 317 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 CTSKP43235 329 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 FAM193AP78312 1265 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 IFI35P80217 286 aaPredicted RBP12.54□□□□□ -0.4
HMG20B-211ENST00000486028 SLC14A1Q13336 389 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 TMEM52BQ4KMG9 183 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 CCDC181Q5TID7 509 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 BBS12Q6ZW61 710 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 DGLUCYQ7Z3D6 616 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 ZSWIM9Q86XI8 627 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 TMEM145Q8NBT3 493 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 FAM174AQ8TBP5 190 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 PDCD6IPQ8WUM4 868 aaKnown RBP12.54□□□□□ -0.4
HMG20B-211ENST00000486028 KLHDC7BQ96G42 594 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 NSMCE3Q96MG7 304 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 OLFM3Q96PB7 478 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 LENG8Q96PV6 779 aaPredicted RBP12.54□□□□□ -0.4
HMG20B-211ENST00000486028 IL12RB2Q99665 862 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 WRAP53Q9BUR4 548 aaKnown RBP12.54□□□□□ -0.4
HMG20B-211ENST00000486028 HEMGNQ9BXL5 484 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 GDF3Q9NR23 364 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.54□□□□□ -0.4
HMG20B-211ENST00000486028 SAE1Q9UBE0 346 aaPredicted RBP12.54□□□□□ -0.4
HMG20B-211ENST00000486028 GGT7Q9UJ14 662 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 GUCA1BQ9UMX6 200 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 HS3ST3A1Q9Y663 406 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 TRPM6Q9BX84 2022 aa12.54□□□□□ -0.4
HMG20B-211ENST00000486028 MTSS1O43312 755 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 TM7SF2O76062 418 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 FTCDO95954 541 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 ZNF883P0CG24 379 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 CA4P22748 312 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 PTPN7P35236 360 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 NXPH1P58417 271 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 DSC2Q02487 901 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 FGL2Q14314 439 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 ARMC12Q5T9G4 340 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 ALG1LQ6GMV1 187 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 ZNF662Q6ZS27 426 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 DCP2Q8IU60 420 aaKnown RBP12.53□□□□□ -0.4
HMG20B-211ENST00000486028 NDUFAF2Q8N183 169 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMG20B-211ENST00000486028 TFB1MQ8WVM0 346 aaKnown RBP12.53□□□□□ -0.4
HMG20B-211ENST00000486028 ALG3Q92685 438 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 MYOCQ99972 504 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 OSBPL8Q9BZF1 889 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 IL21RQ9HBE5 538 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 FZD3Q9NPG1 666 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 SEPT10Q9P0V9 454 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 PHTF1Q9UMS5 762 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 CA5BQ9Y2D0 317 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 PCDHB9Q9Y5E1 797 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 RAI2Q9Y5P3 530 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 CABIN1Q9Y6J0 2220 aa12.53□□□□□ -0.4
HMG20B-211ENST00000486028 SHROOM3Q8TF72 1996 aa12.52□□□□□ -0.4
HMG20B-211ENST00000486028 PCDH15Q96QU1 1955 aa12.52□□□□□ -0.4
HMG20B-211ENST00000486028 ASCC3Q8N3C0 2202 aaKnown RBP12.52□□□□□ -0.41
HMG20B-211ENST00000486028 CFAP69A5D8W1 941 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 HACD1B0YJ81 288 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 KCNK3O14649 394 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 FPGTO14772 594 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 RAD51BO15315 384 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 TJP3O95049 919 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 PGLSO95336 258 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 CPP00450 1065 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 PRKCGP05129 697 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 HLA-DQB2P05538 268 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 PTMAP06454 111 aaKnown RBP12.52□□□□□ -0.41
HMG20B-211ENST00000486028 PYGMP11217 842 aa12.52□□□□□ -0.41
HMG20B-211ENST00000486028 PECAM1P16284 738 aaPredicted RBP12.52□□□□□ -0.41
HMG20B-211ENST00000486028 MMP12P39900 470 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms