RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SCAMP1O15126 338 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 MFSD11O43934 449 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 PEX11BO96011 259 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 ALPPL2P10696 532 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 JUPP14923 745 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 CKMT2P17540 419 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 ARSEP51690 589 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 PFN3P60673 137 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 AP1S1P61966 158 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 C1orf61Q13536 156 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 PTK2BQ14289 1009 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 PDK2Q15119 407 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 WSCD2Q2TBF2 565 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 ODF2Q5BJF6 829 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 FAXCQ5TGI0 409 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 NCBP2-AS2Q69YL0 99 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 CCNI2Q6ZMN8 369 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-204ENST00000486023 TMPRSS7Q7RTY8 843 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 RD3Q7Z3Z2 195 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 RBFAQ8N0V3 343 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 TP53I13Q8NBR0 393 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-204ENST00000486023 ZCCHC14Q8WYQ9 949 aaKnown RBP17.77■□□□□ 0.44
COL6A1-204ENST00000486023 RAPGEF5Q92565 580 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 TMEM121BQ9BXQ6 578 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-204ENST00000486023 TCEAL2Q9H3H9 227 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-204ENST00000486023 HYOU1Q9Y4L1 999 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 ASPMQ8IZT6 3477 aa17.77■□□□□ 0.43
COL6A1-204ENST00000486023 TRPM6Q9BX84 2022 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 LRRD1A4D1F6 860 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 NEMP2A6NFY4 417 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 CSF2P04141 144 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 ELFN1P0C7U0 828 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 NOP2P46087 812 aaKnown RBP17.76■□□□□ 0.43
COL6A1-204ENST00000486023 ACADVLP49748 655 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 EIF2B5Q13144 721 aaKnown RBP17.76■□□□□ 0.43
COL6A1-204ENST00000486023 TBX2Q13207 712 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-204ENST00000486023 ZNF211Q13398 564 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-204ENST00000486023 INPP5AQ14642 412 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 ACOX1Q15067 660 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 GALNT15Q8N3T1 639 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 CCNYQ8ND76 341 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 NUDCD1Q96RS6 583 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 MAK16Q9BXY0 300 aaKnown RBP17.76■□□□□ 0.43
COL6A1-204ENST00000486023 RBSNQ9H1K0 784 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 LCMT1Q9UIC8 334 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 OR1A2Q9Y585 309 aa17.76■□□□□ 0.43
COL6A1-204ENST00000486023 FAM221BA6H8Z2 402 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 TRAFD1O14545 582 aaPredicted RBP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 RECQL5O94762 991 aaPredicted RBP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 DKK1O94907 266 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 NME1P15531 152 aaKnown RBP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 KDELR1P24390 212 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 MAN1A1P33908 653 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 HSPA9P38646 679 aaKnown RBP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 MMP12P39900 470 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 GARSP41250 739 aaKnown RBP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 MAGEA1P43355 309 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 GBE1Q04446 702 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 PAFAH1B3Q15102 231 aaKnown RBP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 PTPRRQ15256 657 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 DEFB133Q30KQ1 61 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 PRRT3Q5FWE3 981 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 FAM182AQ5T1J6 154 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 SARM1Q6SZW1 724 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 ENPP7Q6UWV6 458 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 HID1Q8IV36 788 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 ZNF548Q8NEK5 533 aaPredicted RBP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 OR4C6Q8NH72 309 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 FAM71BQ8TC56 605 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 TSACCQ96A04 125 aaPredicted RBP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 IFT43Q96FT9 208 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 SEMA3CQ99985 751 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 ZNF670Q9BS34 389 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 RBM22Q9NW64 420 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 APOBEC3BQ9UH17 382 aaKnown RBP17.75■□□□□ 0.43
COL6A1-204ENST00000486023 HEY1Q9Y5J3 304 aa17.75■□□□□ 0.43
COL6A1-204ENST00000486023 IGF2RP11717 2491 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 K7ESM1 405 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 AQP9O43315 295 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 CPP00450 1065 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 CTPS1P17812 591 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 YPEL5P62699 121 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 GALNT2Q10471 571 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 TRAF2Q12933 501 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 RALGDSQ12967 914 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 PROX2Q3B8N5 592 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 LIPIQ6XZB0 460 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 PHACTR4Q8IZ21 702 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 PQLC3Q8N755 202 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 TC2NQ8N9U0 490 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 KDF1Q8NAX2 398 aaPredicted RBP17.74■□□□□ 0.43
COL6A1-204ENST00000486023 PLA2G15Q8NCC3 412 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 MDM1Q8TC05 714 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 RNF25Q96BH1 459 aaPredicted RBP17.74■□□□□ 0.43
COL6A1-204ENST00000486023 ECHDC3Q96DC8 303 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 APOLD1Q96LR9 279 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 IL12RB2Q99665 862 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 MGME1Q9BQP7 344 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms