RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 LRRK1Q38SD2 2015 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 TMEM191CA6NGB0 347 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 PRPSAP2O60256 369 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 DXOO77932 396 aaKnown RBP17.28■□□□□ 0.36
SMC4-216ENST00000485645 FTLP02792 175 aaPredicted RBP17.28■□□□□ 0.36
SMC4-216ENST00000485645 GZMAP12544 262 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 CTSEP14091 401 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 ERCC2P18074 760 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 SERPINA4P29622 427 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 LIG3P49916 1009 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 HK3P52790 923 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 ERVPABLB-1P60509 514 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 TLE3Q04726 772 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 ELOCQ15369 112 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 PERM1Q5SV97 790 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 CRTC1Q6UUV9 634 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 ENPP7Q6UWV6 458 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 RBM44Q6ZP01 1051 aaKnown RBP17.28■□□□□ 0.36
SMC4-216ENST00000485645 SRLQ86TD4 932 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 HID1Q8IV36 788 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 TSEN2Q8NCE0 465 aaKnown RBP17.28■□□□□ 0.36
SMC4-216ENST00000485645 FNIP1Q8TF40 1166 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 SCG3Q8WXD2 468 aaKnown RBP17.28■□□□□ 0.36
SMC4-216ENST00000485645 TSACCQ96A04 125 aaPredicted RBP17.28■□□□□ 0.36
SMC4-216ENST00000485645 PEBP4Q96S96 227 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 BPIFA3Q9BQP9 254 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 APOOQ9BUR5 198 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 CINPQ9BW66 212 aaPredicted RBP17.28■□□□□ 0.36
SMC4-216ENST00000485645 SP110Q9HB58 689 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 AIPL1Q9NZN9 384 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 CNOT8Q9UFF9 292 aaKnown RBP17.28■□□□□ 0.36
SMC4-216ENST00000485645 PADI4Q9UM07 663 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 ATP8A1Q9Y2Q0 1164 aa17.28■□□□□ 0.36
SMC4-216ENST00000485645 DFFAO00273 331 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 TCEA3O75764 348 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 RASGRP1O95267 797 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 ALPIP09923 528 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 MIPP30301 263 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 MMP12P39900 470 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 RGRP47804 291 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 INPP5AQ14642 412 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 RFTN1Q14699 578 aaPredicted RBP17.27■□□□□ 0.36
SMC4-216ENST00000485645 AGERQ15109 404 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 PPP6R3Q5H9R7 873 aaPredicted RBP17.27■□□□□ 0.36
SMC4-216ENST00000485645 AFMIDQ63HM1 303 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 ZNF571Q7Z3V5 609 aaPredicted RBP17.27■□□□□ 0.36
SMC4-216ENST00000485645 ZSWIM9Q86XI8 627 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 PSTKQ8IV42 348 aaKnown RBP17.27■□□□□ 0.36
SMC4-216ENST00000485645 ARHGAP12Q8IWW6 846 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 ATL2Q8NHH9 583 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 WDR48Q8TAF3 677 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 NAF1Q96HR8 494 aaKnown RBP17.27■□□□□ 0.36
SMC4-216ENST00000485645 HIC2Q96JB3 615 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 EDEM3Q9BZQ6 932 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 TRIM7Q9C029 511 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 TMEM63CQ9P1W3 806 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 SCINQ9Y6U3 715 aa17.27■□□□□ 0.36
SMC4-216ENST00000485645 A0A1W2PQC6 194 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 CFAP69A5D8W1 941 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 PRKCGP05129 697 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 PCCBP05166 539 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 CELA2BP08218 269 aaPredicted RBP17.26■□□□□ 0.35
SMC4-216ENST00000485645 PRKCIP41743 596 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 HCAR3P49019 387 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 ZNF135P52742 658 aaPredicted RBP17.26■□□□□ 0.35
SMC4-216ENST00000485645 POLR2LP62875 67 aaKnown RBP17.26■□□□□ 0.35
SMC4-216ENST00000485645 BCL2L1Q07817 233 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 IL10RBQ08334 325 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 NSUN2Q08J23 767 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMC4-216ENST00000485645 KLHL30Q0D2K2 578 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 MTM1Q13496 603 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 NFATC4Q14934 902 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 ALG11Q2TAA5 492 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 C3orf38Q5JPI3 329 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 LVRNQ6Q4G3 990 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 GPR155Q7Z3F1 870 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 RD3Q7Z3Z2 195 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 SDR16C5Q8N3Y7 309 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 PAF1Q8N7H5 531 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 ZNF653Q96CK0 615 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 ATXN7L3BQ96GX2 97 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 CCDC3Q9BQI4 270 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 THSD1Q9NS62 852 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 GULP1Q9UBP9 304 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 KLQ9UEF7 1012 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 SATB2Q9UPW6 733 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 OR1A2Q9Y585 309 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 ENTPD2Q9Y5L3 495 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 BPTFQ12830 3046 aa17.26■□□□□ 0.35
SMC4-216ENST00000485645 DDX3XO00571 662 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMC4-216ENST00000485645 LRCH4O75427 683 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 RBMS1P29558 406 aaKnown RBP17.25■□□□□ 0.35
SMC4-216ENST00000485645 SCNN1BP51168 640 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 RENBPP51606 427 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 SRP54P61011 504 aaKnown RBP17.25■□□□□ 0.35
SMC4-216ENST00000485645 CXADRP78310 365 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 BROXQ5VW32 411 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 E4F1Q66K89 784 aaPredicted RBP17.25■□□□□ 0.35
SMC4-216ENST00000485645 IGF2-ASQ6U949 168 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 ARHGAP36Q6ZRI8 547 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms