RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 LIG3P49916 1009 aa25.9■■□□□ 1.74
HLA-F-227ENST00000485513 BLKP51451 505 aa25.9■■□□□ 1.74
HLA-F-227ENST00000485513 GABREP78334 506 aa25.9■■□□□ 1.74
HLA-F-227ENST00000485513 C6orf132Q5T0Z8 1188 aa25.9■■□□□ 1.74
HLA-F-227ENST00000485513 ZSWIM9Q86XI8 627 aa25.9■■□□□ 1.74
HLA-F-227ENST00000485513 SLC35F3Q8IY50 421 aa25.9■■□□□ 1.74
HLA-F-227ENST00000485513 BBC3Q96PG8 261 aaPredicted RBP25.9■■□□□ 1.74
HLA-F-227ENST00000485513 CINPQ9BW66 212 aaPredicted RBP25.9■■□□□ 1.74
HLA-F-227ENST00000485513 CLPBQ9H078 707 aa25.9■■□□□ 1.74
HLA-F-227ENST00000485513 SCINQ9Y6U3 715 aa25.9■■□□□ 1.74
HLA-F-227ENST00000485513 RP1P56715 2156 aa25.9■■□□□ 1.74
HLA-F-227ENST00000485513 A0A1B0GTH6 734 aa25.89■■□□□ 1.74
HLA-F-227ENST00000485513 MUSKO15146 869 aa25.89■■□□□ 1.74
HLA-F-227ENST00000485513 LZTS3O60299 673 aaPredicted RBP25.89■■□□□ 1.74
HLA-F-227ENST00000485513 LRCH4O75427 683 aa25.89■■□□□ 1.74
HLA-F-227ENST00000485513 ZNF135P52742 658 aaPredicted RBP25.89■■□□□ 1.74
HLA-F-227ENST00000485513 LSMEM2Q8N112 164 aa25.89■■□□□ 1.74
HLA-F-227ENST00000485513 NPWQ8N729 165 aa25.89■■□□□ 1.74
HLA-F-227ENST00000485513 TPCN2Q8NHX9 752 aa25.89■■□□□ 1.74
HLA-F-227ENST00000485513 TRIM11Q96F44 468 aa25.89■■□□□ 1.74
HLA-F-227ENST00000485513 NAP1L5Q96NT1 182 aaPredicted RBP25.89■■□□□ 1.74
HLA-F-227ENST00000485513 YY2O15391 372 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 PRKCGP05129 697 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 HTR1BP28222 390 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 LSSP48449 732 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 HCAR3P49019 387 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 HK3P52790 923 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 IL10RBQ08334 325 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 CCDC173Q0VFZ6 552 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 INPP5AQ14642 412 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 RFTN1Q14699 578 aaPredicted RBP25.88■■□□□ 1.73
HLA-F-227ENST00000485513 AGERQ15109 404 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 ISXQ2M1V0 245 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 ARHGAP36Q6ZRI8 547 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 HID1Q8IV36 788 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 FSTL5Q8N475 847 aaPredicted RBP25.88■■□□□ 1.73
HLA-F-227ENST00000485513 NAT6Q93015 286 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 ZNF578Q96N58 590 aaPredicted RBP25.88■■□□□ 1.73
HLA-F-227ENST00000485513 APOOQ9BUR5 198 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 EDEM3Q9BZQ6 932 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 PRORYQ9H606 182 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 POLR1BQ9H9Y6 1135 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 MRPL47Q9HD33 250 aaKnown RBP25.88■■□□□ 1.73
HLA-F-227ENST00000485513 CWC15Q9P013 229 aaKnown RBP25.88■■□□□ 1.73
HLA-F-227ENST00000485513 MYO1AQ9UBC5 1043 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 DOLKQ9UPQ8 538 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 RAI2Q9Y5P3 530 aa25.88■■□□□ 1.73
HLA-F-227ENST00000485513 DXOO77932 396 aaKnown RBP25.87■■□□□ 1.73
HLA-F-227ENST00000485513 MYBL1P10243 752 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 SKILP12757 684 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 BCL2L1Q07817 233 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 NSUN2Q08J23 767 aaKnown RBP eCLIP25.87■■□□□ 1.73
HLA-F-227ENST00000485513 NFATC4Q14934 902 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 ACAP1Q15027 740 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 ELOCQ15369 112 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 ALG11Q2TAA5 492 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 PERM1Q5SV97 790 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 ESRP1Q6NXG1 681 aaKnown RBP25.87■■□□□ 1.73
HLA-F-227ENST00000485513 CAVIN1Q6NZI2 390 aaKnown RBP25.87■■□□□ 1.73
HLA-F-227ENST00000485513 CRTC1Q6UUV9 634 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 ENPP7Q6UWV6 458 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 PAF1Q8N7H5 531 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 TSACCQ96A04 125 aaPredicted RBP25.87■■□□□ 1.73
HLA-F-227ENST00000485513 OR1A2Q9Y585 309 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 SHROOM3Q8TF72 1996 aa25.87■■□□□ 1.73
HLA-F-227ENST00000485513 COL27A1Q8IZC6 1860 aaPredicted RBP25.87■■□□□ 1.73
HLA-F-227ENST00000485513 RASGRP1O95267 797 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 PCCBP05166 539 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 CELA2BP08218 269 aaPredicted RBP25.86■■□□□ 1.73
HLA-F-227ENST00000485513 CTSEP14091 401 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 MTM1Q13496 603 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 DPYSQ14117 519 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 RBM44Q6ZP01 1051 aaKnown RBP25.86■■□□□ 1.73
HLA-F-227ENST00000485513 LZTR1Q8N653 840 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 ZNF248Q8NDW4 579 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 ATL2Q8NHH9 583 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 SCG3Q8WXD2 468 aaKnown RBP25.86■■□□□ 1.73
HLA-F-227ENST00000485513 GRAMD1AQ96CP6 724 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 ECHDC3Q96DC8 303 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 LGMNQ99538 433 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 ZWILCHQ9H900 591 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 PADI4Q9UM07 663 aa25.86■■□□□ 1.73
HLA-F-227ENST00000485513 LRP4O75096 1905 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 CFAP69A5D8W1 941 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 EIF4E1BA6NMX2 242 aaKnown RBP25.85■■□□□ 1.73
HLA-F-227ENST00000485513 SERPINC1P01008 464 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 ALPIP09923 528 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 PCK1P35558 622 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 SCNN1BP51168 640 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 PCBP4P57723 403 aaKnown RBP25.85■■□□□ 1.73
HLA-F-227ENST00000485513 RD3Q7Z3Z2 195 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 SPACA3Q8IXA5 215 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 UBL7Q96S82 380 aaPredicted RBP25.85■■□□□ 1.73
HLA-F-227ENST00000485513 ISCUQ9H1K1 167 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 KLQ9UEF7 1012 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 SEPT3Q9UH03 358 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 BPTFQ12830 3046 aa25.85■■□□□ 1.73
HLA-F-227ENST00000485513 H3BRJ5 948 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 TCEA3O75764 348 aa25.84■■□□□ 1.73
HLA-F-227ENST00000485513 RENBPP51606 427 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms