RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PCDH18Q9HCL0 1135 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 DYRK4Q9NR20 520 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 GPATCH2LQ9NWQ4 482 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 DDX56Q9NY93 547 aaKnown RBP10.12□□□□□ -0.79
CPSF4-213ENST00000484112 IL36AQ9UHA7 158 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 MFHAS1Q9Y4C4 1052 aa10.12□□□□□ -0.79
CPSF4-213ENST00000484112 PTPRQQ9UMZ3 2332 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 SOWAHDA6NJG2 315 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 CYSRT1A8MQ03 144 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 B8ZZF3 427 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 K7ESM1 405 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 PJA2O43164 708 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 PSTPIP1O43586 416 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 BUB1O43683 1085 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 NRDCO43847 1150 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 PRAMEF11O60813 436 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 ZNF821O75541 412 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 POP4O95707 220 aaKnown RBP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 CTSLP07711 333 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 GIMD1P0DJR0 217 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 TCF4P15884 667 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 HNRNPA2B1P22626 353 aaKnown RBP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 IL4RP24394 825 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 RBMS1P29558 406 aaKnown RBP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 HSPA9P38646 679 aaKnown RBP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 CSNK1DP48730 415 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 CDH6P55285 790 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 ERVPABLB-1P60509 514 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 IL10RBQ08334 325 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 VAC14Q08AM6 782 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 MESDQ14696 234 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 IFI16Q16666 785 aaKnown RBP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 CDKN3Q16667 212 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 ZNF284Q2VY69 593 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 KIAA1614Q5VZ46 1190 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 SEL1L3Q68CR1 1132 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 C11orf63Q6NUN7 778 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 NEK5Q6P3R8 708 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 CRTC1Q6UUV9 634 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 LINGO4Q6UY18 593 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 Q6ZSR6 202 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 PTAR1Q7Z6K3 402 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 ZNF354CQ86Y25 554 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 KCTD6Q8NC69 237 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 OR2AP1Q8NGE2 309 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 GRIN3AQ8TCU5 1115 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 FATE1Q969F0 183 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 ARRDC3Q96B67 414 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 FAF2Q96CS3 445 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 HMCESQ96FZ2 354 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 WBP1Q96G27 269 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 GDAP1L1Q96MZ0 367 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 HEPHQ9BQS7 1158 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 HDAC8Q9BY41 377 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 SLC39A8Q9C0K1 460 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 PDFQ9HBH1 243 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 THSD1Q9NS62 852 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 EVA1BQ9NVM1 165 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 HAUS2Q9NVX0 235 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 NLGN3Q9NZ94 848 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 UBA2Q9UBT2 640 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 IPO11Q9UI26 975 aaKnown RBP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 SATB2Q9UPW6 733 aa10.11□□□□□ -0.79
CPSF4-213ENST00000484112 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 ARID1BQ8NFD5 2236 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-213ENST00000484112 NYNRINQ9P2P1 1898 aaKnown RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 DOCK9Q9BZ29 2069 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 K7ERQ8 282 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 RNF103O00237 685 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 SCAMP1O15126 338 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 SMAD6O43541 496 aaKnown RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 SLC28A2O43868 658 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 DXOO77932 396 aaKnown RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 IGSF6O95976 241 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 GP1BAP07359 652 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 C6P13671 934 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 ZFXP17010 805 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 MX2P20592 715 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 TGM2P21980 687 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 ITGB7P26010 798 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 NOP2P46087 812 aaKnown RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 PAPOLAP51003 745 aaKnown RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 RENBPP51606 427 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 SUOXP51687 545 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 CCNHP51946 323 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 VAV2P52735 878 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 KCNC4Q03721 635 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 NSUN2Q08J23 767 aaKnown RBP eCLIP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 DPYSL3Q14195 570 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 PAFAH1B3Q15102 231 aaKnown RBP10.1□□□□□ -0.79
CPSF4-213ENST00000484112 ISXQ2M1V0 245 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 ODF2Q5BJF6 829 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 ANKRD20A8PQ5CZ79 823 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 ARSIQ5FYB1 569 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 RALGPS1Q5JS13 557 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 TXNRD3NBQ6F5E7 133 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 GCNT7Q6ZNI0 430 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 DPY19L3Q6ZPD9 716 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 TMEM139Q8IV31 216 aa10.1□□□□□ -0.79
CPSF4-213ENST00000484112 ARHGAP12Q8IWW6 846 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms