RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 PFDN4Q9NQP4 134 aa9.23□□□□□ -0.93
TTC3-218ENST00000484047 OSGIN1Q9UJX0 560 aa9.23□□□□□ -0.93
TTC3-218ENST00000484047 ZFR2Q9UPR6 939 aaKnown RBP9.23□□□□□ -0.93
TTC3-218ENST00000484047 PIK3C2BO00750 1634 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 ERVK-7P63135 1459 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 NOS1P29475 1434 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 A0A1W2PR77 199 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 NPIPB11E5RHQ5 1161 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 CDKL5O76039 1030 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 RECQL5O94762 991 aaPredicted RBP9.22□□□□□ -0.93
TTC3-218ENST00000484047 IGHDP01880 384 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 TPOP07202 933 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 SUOXP51687 545 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 SLC12A2P55011 1212 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 ZRANB3Q5FWF4 1079 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 LMNTD2Q8IXW0 634 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 LGI4Q8N135 537 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 XXYLT1Q8NBI6 393 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 RFKQ969G6 155 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 EXOC4Q96A65 974 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 RNF26Q9BY78 433 aaPredicted RBP9.22□□□□□ -0.93
TTC3-218ENST00000484047 AKIP1Q9NQ31 210 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
TTC3-218ENST00000484047 PLAGL1Q9UM63 463 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 DHDHQ9UQ10 334 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.22□□□□□ -0.93
TTC3-218ENST00000484047 SPATA31D1Q6ZQQ2 1576 aa9.22□□□□□ -0.93
TTC3-218ENST00000484047 A6NL46 340 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 CSE1LP55060 971 aaKnown RBP9.21□□□□□ -0.93
TTC3-218ENST00000484047 NXPH1P58417 271 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 HHEXQ03014 270 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 C15orf59Q2T9L4 293 aaPredicted RBP9.21□□□□□ -0.93
TTC3-218ENST00000484047 FBLN7Q53RD9 439 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 OTOAQ7RTW8 1153 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 NUP54Q7Z3B4 507 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 FIBINQ8TAL6 211 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 KCNE4Q8WWG9 221 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 CCDC114Q96M63 670 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 ADAD1Q96M93 576 aaKnown RBP9.21□□□□□ -0.93
TTC3-218ENST00000484047 CCDC43Q96MW1 224 aaKnown RBP9.21□□□□□ -0.93
TTC3-218ENST00000484047 ASNSD1Q9NWL6 643 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 SEMA5BQ9P283 1151 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 LRIT1Q9P2V4 623 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 AMACRQ9UHK6 382 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 DTX4Q9Y2E6 619 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 CLDN16Q9Y5I7 305 aa9.21□□□□□ -0.93
TTC3-218ENST00000484047 MYO5BQ9ULV0 1848 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 CBY3A6NI87 242 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 WDR46O15213 610 aaKnown RBP9.21□□□□□ -0.94
TTC3-218ENST00000484047 HCRTR2O43614 444 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 SNRNP70P08621 437 aaKnown RBP9.21□□□□□ -0.94
TTC3-218ENST00000484047 MED14OSP0DP75 135 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 SLC2A4P14672 509 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 PCSK6P29122 969 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 CD86P42081 329 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 AMPHP49418 695 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 ZNF84P51523 738 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 CCR3P51677 355 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 DMWDQ09019 674 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 PKN1Q16512 942 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 BEAN1Q3B7T3 259 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 PTCD3Q96EY7 689 aaKnown RBP9.21□□□□□ -0.94
TTC3-218ENST00000484047 ABHD14AQ9BUJ0 271 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 TXNRD2Q9NNW7 524 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 ICKQ9UPZ9 632 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 BTBD3Q9Y2F9 522 aa9.21□□□□□ -0.94
TTC3-218ENST00000484047 FAM237AA0A1B0GTK4 181 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 TCRBV21S2A2A0A5A6 115 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 ARHGEF37A1IGU5 675 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 SLC4A1P02730 911 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 FYNP06241 537 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 TNFRSF1AP19438 455 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 ACTN3Q08043 901 aaPredicted RBP9.2□□□□□ -0.94
TTC3-218ENST00000484047 PPA1Q15181 289 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 CNGA3Q16281 694 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 ME3Q16798 604 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 RNASE12Q5GAN4 147 aaKnown RBP9.2□□□□□ -0.94
TTC3-218ENST00000484047 ERC1Q8IUD2 1116 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 DPP10Q8N608 796 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 PI4KAP1Q8N8J0 262 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 TC2NQ8N9U0 490 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 IP6K1Q92551 441 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 CFAP57Q96MR6 1250 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 ADGRE3Q9BY15 652 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 NRIP3Q9NQ35 241 aa9.2□□□□□ -0.94
TTC3-218ENST00000484047 DDX43Q9NXZ2 648 aaKnown RBP9.2□□□□□ -0.94
TTC3-218ENST00000484047 DDX39AO00148 427 aaKnown RBP9.19□□□□□ -0.94
TTC3-218ENST00000484047 SLC25A12O75746 678 aa9.19□□□□□ -0.94
TTC3-218ENST00000484047 TFP02787 698 aa9.19□□□□□ -0.94
TTC3-218ENST00000484047 DLDP09622 509 aaKnown RBP9.19□□□□□ -0.94
TTC3-218ENST00000484047 IRF1P10914 325 aa9.19□□□□□ -0.94
TTC3-218ENST00000484047 MMP9P14780 707 aa9.19□□□□□ -0.94
TTC3-218ENST00000484047 ARSFP54793 590 aa9.19□□□□□ -0.94
TTC3-218ENST00000484047 CLDN2P57739 230 aa9.19□□□□□ -0.94
TTC3-218ENST00000484047 RHAGQ02094 409 aa9.19□□□□□ -0.94
TTC3-218ENST00000484047 CFHR3Q02985 330 aa9.19□□□□□ -0.94
TTC3-218ENST00000484047 TNIP1Q15025 636 aa9.19□□□□□ -0.94
TTC3-218ENST00000484047 PARP10Q53GL7 1025 aa9.19□□□□□ -0.94
TTC3-218ENST00000484047 MEX3CQ5U5Q3 659 aaKnown RBP9.19□□□□□ -0.94
TTC3-218ENST00000484047 KRT79Q5XKE5 535 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms