RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 LRRC14Q15048 493 aa13□□□□□ -0.33
UBR4-213ENST00000483922 AGERQ15109 404 aa13□□□□□ -0.33
UBR4-213ENST00000483922 CERCAMQ5T4B2 595 aa13□□□□□ -0.33
UBR4-213ENST00000483922 ACBD5Q5T8D3 534 aaPredicted RBP13□□□□□ -0.33
UBR4-213ENST00000483922 RWDD4Q6NW29 188 aaKnown RBP13□□□□□ -0.33
UBR4-213ENST00000483922 CLEC18BQ6UXF7 455 aa13□□□□□ -0.33
UBR4-213ENST00000483922 SPRED1Q7Z699 444 aa13□□□□□ -0.33
UBR4-213ENST00000483922 PHLDB2Q86SQ0 1253 aa13□□□□□ -0.33
UBR4-213ENST00000483922 CCDC185Q8N715 623 aa13□□□□□ -0.33
UBR4-213ENST00000483922 CLEC18CQ8NCF0 446 aa13□□□□□ -0.33
UBR4-213ENST00000483922 TMEM35BQ8NCS4 154 aa13□□□□□ -0.33
UBR4-213ENST00000483922 JOSD2Q8TAC2 188 aa13□□□□□ -0.33
UBR4-213ENST00000483922 CXorf40AQ8TE69 158 aa13□□□□□ -0.33
UBR4-213ENST00000483922 CPA5Q8WXQ8 436 aa13□□□□□ -0.33
UBR4-213ENST00000483922 FAM81BQ96LP2 452 aa13□□□□□ -0.33
UBR4-213ENST00000483922 NSMCE3Q96MG7 304 aa13□□□□□ -0.33
UBR4-213ENST00000483922 OSBPL1AQ9BXW6 950 aa13□□□□□ -0.33
UBR4-213ENST00000483922 SLC25A18Q9H1K4 315 aa13□□□□□ -0.33
UBR4-213ENST00000483922 MAGEH1Q9H213 219 aa13□□□□□ -0.33
UBR4-213ENST00000483922 FGF22Q9HCT0 170 aa13□□□□□ -0.33
UBR4-213ENST00000483922 DKK3Q9UBP4 350 aa13□□□□□ -0.33
UBR4-213ENST00000483922 DOLKQ9UPQ8 538 aa13□□□□□ -0.33
UBR4-213ENST00000483922 USP9YO00507 2555 aaPredicted RBP13□□□□□ -0.33
UBR4-213ENST00000483922 A0A1W2PQC6 194 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.99□□□□□ -0.33
UBR4-213ENST00000483922 GADD45BO75293 160 aaPredicted RBP12.99□□□□□ -0.33
UBR4-213ENST00000483922 FGF3P11487 239 aaPredicted RBP12.99□□□□□ -0.33
UBR4-213ENST00000483922 GLB1P16278 677 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 MAPKAPK2P49137 400 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 LIG3P49916 1009 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 SNX16P57768 344 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 UBAP2LQ14157 1087 aaKnown RBP12.99□□□□□ -0.33
UBR4-213ENST00000483922 POLD3Q15054 466 aaPredicted RBP12.99□□□□□ -0.33
UBR4-213ENST00000483922 SKIDA1Q1XH10 827 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 TAF3Q5VWG9 929 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 ARCQ7LC44 396 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 NOP9Q86U38 636 aaKnown RBP12.99□□□□□ -0.33
UBR4-213ENST00000483922 GKN2Q86XP6 184 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 CREBRFQ8IUR6 639 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 PYROXD2Q8N2H3 581 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 FAM46DQ8NEK8 389 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 SCG3Q8WXD2 468 aaKnown RBP12.99□□□□□ -0.33
UBR4-213ENST00000483922 NKD1Q969G9 470 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 ARHGEF26Q96DR7 871 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 LGR4Q9BXB1 951 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 NAA15Q9BXJ9 866 aaKnown RBP12.99□□□□□ -0.33
UBR4-213ENST00000483922 TMEM168Q9H0V1 697 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 EPN3Q9H201 632 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 RDH14Q9HBH5 336 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 PCDH12Q9NPG4 1184 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 SPATS2LQ9NUQ6 558 aaKnown RBP12.99□□□□□ -0.33
UBR4-213ENST00000483922 LRIT1Q9P2V4 623 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 LHX3Q9UBR4 397 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 PAXBP1Q9Y5B6 917 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 ST14Q9Y5Y6 855 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 DGKBQ9Y6T7 804 aa12.99□□□□□ -0.33
UBR4-213ENST00000483922 SDK2Q58EX2 2172 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 ZFC3H1O60293 1989 aaKnown RBP12.98□□□□□ -0.33
UBR4-213ENST00000483922 TSPAN11A1L157 253 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 TMEM110-MUSTN1A8MSY1 372 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 BUB1O43683 1085 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 TNFP01375 233 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 MMEP08473 750 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 PLEKP08567 350 aaPredicted RBP12.98□□□□□ -0.33
UBR4-213ENST00000483922 PNLIPP16233 465 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 HDAC4P56524 1084 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 OR1D5P58170 312 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 NOMO3P69849 1222 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 UGP2Q16851 508 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 C17orf82Q86X59 251 aaPredicted RBP12.98□□□□□ -0.33
UBR4-213ENST00000483922 NRROSQ86YC3 692 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 RCBTB1Q8NDN9 531 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 OR6C4Q8NGE1 309 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 PTCD2Q8WV60 388 aaKnown RBP12.98□□□□□ -0.33
UBR4-213ENST00000483922 RXFP2Q8WXD0 754 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 CENPIQ92674 756 aaPredicted RBP12.98□□□□□ -0.33
UBR4-213ENST00000483922 HMCESQ96FZ2 354 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 EXOC2Q96KP1 924 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 WDR92Q96MX6 357 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 METTL5Q9NRN9 209 aaKnown RBP12.98□□□□□ -0.33
UBR4-213ENST00000483922 SEPT10Q9P0V9 454 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 KLQ9UEF7 1012 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 RWDD2AQ9UIY3 292 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 HOOK1Q9UJC3 728 aaKnown RBP12.98□□□□□ -0.33
UBR4-213ENST00000483922 DAAM1Q9Y4D1 1078 aa12.98□□□□□ -0.33
UBR4-213ENST00000483922 USP9XQ93008 2570 aaPredicted RBP12.98□□□□□ -0.33
UBR4-213ENST00000483922 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 RAMP2O60895 175 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 PPFIA2O75334 1257 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 PCCBP05166 539 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 SFTPCP11686 197 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 RGRP47804 291 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 RALGDSQ12967 914 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 CDO1Q16878 200 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 C14orf28Q4W4Y0 310 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 INO80DQ53TQ3 878 aaPredicted RBP12.97□□□□□ -0.33
UBR4-213ENST00000483922 EFHC2Q5JST6 749 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 MIIPQ5JXC2 388 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 PHF19Q5T6S3 580 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms