RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 PPP1R12AO14974 1030 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-225ENST00000483506 RAD51BO15315 384 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 PAK4O96013 591 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-225ENST00000483506 CEACAM1P13688 526 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 ITIH2P19823 946 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 TGM2P21980 687 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 PTPN7P35236 360 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 RXRGP48443 463 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 PEX5P50542 639 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 CCT8P50990 548 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 NAP1L1P55209 391 aaKnown RBP18.13■□□□□ 0.49
HDAC6-225ENST00000483506 TRAF2Q12933 501 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 SGCGQ13326 291 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 PPM1JQ5JR12 505 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 NPNTQ6UXI9 565 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 KYAT3Q6YP21 454 aaKnown RBP18.13■□□□□ 0.49
HDAC6-225ENST00000483506 BZW1Q7L1Q6 419 aaKnown RBP18.13■□□□□ 0.49
HDAC6-225ENST00000483506 NT5DC3Q86UY8 548 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 OXR1Q8N573 874 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 CXorf40AQ8TE69 158 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 CENPTQ96BT3 561 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 KLHDC7BQ96G42 594 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 ELF4Q99607 663 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-225ENST00000483506 SEMA3CQ99985 751 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 FZD3Q9NPG1 666 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 TRIM10Q9UDY6 481 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 EFR3BQ9Y2G0 817 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 ADGRG1Q9Y653 693 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 A0A0U1RQJ8 604 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 A6NNZ2 444 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 YKT6O15498 198 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 FZD6O60353 706 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 CST8O60676 142 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 MMP20O60882 483 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 TM7SF2O76062 418 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 HLA-DQB2P05538 268 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 KRT10P13645 584 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 FOXK2Q01167 660 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 ADCY2Q08462 1091 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 RALGDSQ12967 914 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 SHBQ15464 509 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 DPPA4Q7L190 304 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 DCP2Q8IU60 420 aaKnown RBP18.12■□□□□ 0.49
HDAC6-225ENST00000483506 SYCE1Q8N0S2 351 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 RNF10Q8N5U6 811 aaKnown RBP18.12■□□□□ 0.49
HDAC6-225ENST00000483506 CCNYQ8ND76 341 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 ARRDC2Q8TBH0 407 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 BMFQ96LC9 184 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 GRPEL1Q9HAV7 217 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 PPIL1Q9Y3C6 166 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 PCDHGC4Q9Y5F7 938 aa18.12■□□□□ 0.49
HDAC6-225ENST00000483506 MACROD2A1Z1Q3 448 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 PGLSO95336 258 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 THEGLP0DJG4 465 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 NOVA1P51513 510 aaKnown RBP18.11■□□□□ 0.49
HDAC6-225ENST00000483506 CLDN2P57739 230 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 DYNLT1P63172 113 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 ZBTB17Q13105 803 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 IHHQ14623 411 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 PRKD1Q15139 912 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-225ENST00000483506 BBS12Q6ZW61 710 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 NAXDQ8IW45 347 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 LRRC8AQ8IWT6 810 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 CNTD1Q8N815 330 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 TP53I13Q8NBR0 393 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-225ENST00000483506 OR13H1Q8NG92 308 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 BAHD1Q8TBE0 780 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-225ENST00000483506 LRRN4Q8WUT4 740 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 MYOCQ99972 504 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 WRAP53Q9BUR4 548 aaKnown RBP18.11■□□□□ 0.49
HDAC6-225ENST00000483506 C1QTNF7Q9BXJ2 289 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 TSGA10Q9BZW7 698 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 SLC32A1Q9H598 525 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 PHTF1Q9UMS5 762 aa18.11■□□□□ 0.49
HDAC6-225ENST00000483506 POM121BA6NF01 834 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 KCNK1O00180 336 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 KCNK3O14649 394 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 TOR1BO14657 336 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 FPGTO14772 594 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 FLRT2O43155 660 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 CBFA2T3O75081 653 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 CPP00450 1065 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 JCHAINP01591 159 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 C6P13671 934 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 PECAM1P16284 738 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-225ENST00000483506 RABIFP47224 123 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 LIG3P49916 1009 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 PFN3P60673 137 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 DSC2Q02487 901 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 NIPAL4Q0D2K0 466 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 SUZ12Q15022 739 aaKnown RBP18.1■□□□□ 0.49
HDAC6-225ENST00000483506 ARMC12Q5T9G4 340 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 PSAPL1Q6NUJ1 521 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 ZNF662Q6ZS27 426 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 CCDC50Q8IVM0 306 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 SLC22A18ASQ8N1D0 253 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 DEFB124Q8NES8 71 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 UBE2Q2Q8WVN8 375 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 PIH1D2Q8WWB5 315 aa18.1■□□□□ 0.49
HDAC6-225ENST00000483506 ALG3Q92685 438 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms