RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 MKI67P46013 3256 aaKnown RBP13.31□□□□□ -0.28
CPNE1-225ENST00000483495 TRAV19A0A0A6YYK7 116 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 TARM1B6A8C7 271 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-225ENST00000483495 HGSO14964 777 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-225ENST00000483495 H2AFYO75367 372 aaKnown RBP13.31□□□□□ -0.28
CPNE1-225ENST00000483495 RPP40O75818 363 aaKnown RBP13.31□□□□□ -0.28
CPNE1-225ENST00000483495 S1PR4O95977 384 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 GLUD1P00367 558 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 ATP5BP06576 529 aaKnown RBP13.31□□□□□ -0.28
CPNE1-225ENST00000483495 CKMP06732 381 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 SBK3P0C264 359 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 ZNF789Q5FWF6 425 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 RALGPS1Q5JS13 557 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 FAM91A1Q658Y4 838 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 ZYG11AQ6WRX3 759 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 PTAR1Q7Z6K3 402 aaPredicted RBP13.31□□□□□ -0.28
CPNE1-225ENST00000483495 MRPL43Q8N983 215 aaKnown RBP13.31□□□□□ -0.28
CPNE1-225ENST00000483495 OR6P1Q8NGX9 317 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 PIWIL2Q8TC59 973 aaKnown RBP13.31□□□□□ -0.28
CPNE1-225ENST00000483495 PHOSPHO2Q8TCD6 241 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 HERVK_113Q902F9 699 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 ELMO2Q96JJ3 720 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 DNAJC1Q96KC8 554 aaKnown RBP13.31□□□□□ -0.28
CPNE1-225ENST00000483495 EXOC2Q96KP1 924 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 TBATAQ96M53 351 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 TSNARE1Q96NA8 513 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 SORT1Q99523 831 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 TASP1Q9H6P5 420 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 SAR1AQ9NR31 198 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 OXSMQ9NWU1 459 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 LHX3Q9UBR4 397 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 PRKAG2Q9UGJ0 569 aa13.31□□□□□ -0.28
CPNE1-225ENST00000483495 TMEM114B3SHH9 223 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 SCAMP3O14828 347 aaKnown RBP13.3□□□□□ -0.28
CPNE1-225ENST00000483495 TRIM13O60858 407 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 KLHL2O95198 593 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 CRTAMO95727 393 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 T-ENOLP0DO92 83 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 SAT1P21673 171 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 ARRB2P32121 409 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 AVPR1AP37288 418 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 CSKP41240 450 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 ZNF140P52738 457 aaPredicted RBP13.3□□□□□ -0.28
CPNE1-225ENST00000483495 PRKAA2P54646 552 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 EPHA5P54756 1037 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 ABCE1P61221 599 aaKnown RBP13.3□□□□□ -0.28
CPNE1-225ENST00000483495 CDH18Q13634 790 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 ITGA9Q13797 1035 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 TSNAXIP1Q2TAA8 658 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 RBM20Q5T481 1227 aaKnown RBP13.3□□□□□ -0.28
CPNE1-225ENST00000483495 NCEH1Q6PIU2 408 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 ATG14Q6ZNE5 492 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 GPATCH11Q8N954 259 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 WFDC5Q8TCV5 224 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 KCTD4Q8WVF5 259 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 SCG3Q8WXD2 468 aaKnown RBP13.3□□□□□ -0.28
CPNE1-225ENST00000483495 GCNAQ96QF7 691 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 STN1Q9H668 368 aaKnown RBP13.3□□□□□ -0.28
CPNE1-225ENST00000483495 SLC40A1Q9NP59 571 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 ASAH2Q9NR71 780 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 ARHGEF3Q9NR81 526 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 NLE1Q9NVX2 485 aaPredicted RBP13.3□□□□□ -0.28
CPNE1-225ENST00000483495 CFAP97Q9P2B7 532 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 MARCH4Q9P2E8 410 aaPredicted RBP13.3□□□□□ -0.28
CPNE1-225ENST00000483495 VPS51Q9UID3 782 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 VPS28Q9UK41 221 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 RUVBL2Q9Y230 463 aaKnown RBP13.3□□□□□ -0.28
CPNE1-225ENST00000483495 SH3BP1Q9Y3L3 701 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 RAI2Q9Y5P3 530 aa13.3□□□□□ -0.28
CPNE1-225ENST00000483495 A0A1W2PRU2 124 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 LCHNA4D1U4 455 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 HIDE1A8MVS5 230 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 LYPLA1O75608 230 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 WISP3O95389 354 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 GOT2P00505 430 aaKnown RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 OGNP20774 298 aaKnown RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 SERPINB3P29508 390 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 CLCN4P51793 760 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 DLG1Q12959 904 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 TAF1AQ15573 450 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 MPPE1Q53F39 396 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 LRRC8EQ6NSJ5 796 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 LINGO4Q6UY18 593 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 WDR75Q8IWA0 830 aaKnown RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 MFN1Q8IWA4 741 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 BBS7Q8IWZ6 715 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 FSTL5Q8N475 847 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 TDRD5Q8NAT2 981 aaKnown RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 SREK1Q8WXA9 508 aaKnown RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 TSPAN17Q96FV3 270 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 OLFM1Q99784 485 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 SLC46A2Q9BY10 475 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 WWP1Q9H0M0 922 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 CORO1CQ9ULV4 474 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 ARHGAP26Q9UNA1 814 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 DNAJC16Q9Y2G8 782 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 SPO11Q9Y5K1 396 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 CXorf51AA0A1B0GTR3 108 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms