RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 ESRRBO95718 433 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 MPOP05164 745 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 SBK3P0C264 359 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 BMP2P12643 396 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 BCAT1P54687 386 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 NME5P56597 212 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 FAM110CQ1W6H9 321 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 LRRC8EQ6NSJ5 796 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 GALNT18Q6P9A2 607 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 CHST15Q7LFX5 561 aaPredicted RBP14.39□□□□□ -0.11
COL9A2-207ENST00000482722 CTU1Q7Z7A3 348 aaKnown RBP14.39□□□□□ -0.11
COL9A2-207ENST00000482722 TLK2Q86UE8 772 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 LINC01465Q8N7H1 131 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 SCAIQ8N9R8 606 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 ANKRD52Q8NB46 1076 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL9A2-207ENST00000482722 FBXL20Q96IG2 436 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 VTI1BQ9UEU0 232 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 M0QYT0 321 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 MT-CO1P00395 513 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 CYP2C9P11712 490 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 RPS3AP61247 264 aaKnown RBP14.39□□□□□ -0.11
COL9A2-207ENST00000482722 TRAP1Q12931 704 aaKnown RBP14.39□□□□□ -0.11
COL9A2-207ENST00000482722 NFATC3Q12968 1075 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 LRP8Q14114 963 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 PITRM1Q5JRX3 1037 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 C9orf57Q5W0N0 161 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 ZYG11AQ6WRX3 759 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 KCTD8Q6ZWB6 473 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 EPHX4Q8IUS5 362 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 OFCC1Q8IZS5 231 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 HMGCLL1Q8TB92 370 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 RNF139Q8WU17 664 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 KCTD4Q8WVF5 259 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 DUS3LQ96G46 650 aaKnown RBP14.39□□□□□ -0.11
COL9A2-207ENST00000482722 VPS39Q96JC1 886 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 CACNA2D2Q9NY47 1150 aa14.39□□□□□ -0.11
COL9A2-207ENST00000482722 HSPA1AP0DMV8 641 aaKnown RBP14.38□□□□□ -0.11
COL9A2-207ENST00000482722 HSPA1BP0DMV9 641 aaKnown RBP14.38□□□□□ -0.11
COL9A2-207ENST00000482722 TKTP29401 623 aaKnown RBP14.38□□□□□ -0.11
COL9A2-207ENST00000482722 AFF1P51825 1210 aaKnown RBP14.38□□□□□ -0.11
COL9A2-207ENST00000482722 MERTKQ12866 999 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 GRM3Q14832 879 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 KYAT1Q16773 422 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 FBXO47Q5MNV8 452 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 REP15Q6BDI9 236 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 RPS27LQ71UM5 84 aaKnown RBP14.38□□□□□ -0.11
COL9A2-207ENST00000482722 PIGZQ86VD9 579 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 TMEM151AQ8N4L1 468 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 TRUB1Q8WWH5 349 aaKnown RBP14.38□□□□□ -0.11
COL9A2-207ENST00000482722 CYGBQ8WWM9 190 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 CCDC68Q9H2F9 335 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 PALMDQ9NP74 551 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 VANGL2Q9ULK5 521 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 RUVBL2Q9Y230 463 aaKnown RBP14.38□□□□□ -0.11
COL9A2-207ENST00000482722 C1orf232A0A0U1RR37 186 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 KRBA1A5PL33 1030 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 TRIM64BA6NI03 449 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 SNAP91O60641 907 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 CNOT3O75175 753 aaKnown RBP14.38□□□□□ -0.11
COL9A2-207ENST00000482722 GRIA3P42263 894 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 TNK2Q07912 1038 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 ERMP1Q7Z2K6 904 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 ZDHHC17Q8IUH5 632 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 MFSD2AQ8NA29 543 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 C17orf50Q8WW18 174 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 TAMM41Q96BW9 452 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 SNX27Q96L92 541 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 SLC39A3Q9BRY0 314 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 NAT9Q9BTE0 207 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 IL22Q9GZX6 179 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 SPAG4Q9NPE6 437 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 MRPL40Q9NQ50 206 aaKnown RBP14.38□□□□□ -0.11
COL9A2-207ENST00000482722 CD300AQ9UGN4 299 aa14.38□□□□□ -0.11
COL9A2-207ENST00000482722 ZCWPW2A0A1B0GU75 182 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 SDHDO14521 159 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 PGK1P00558 417 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 HNRNPLP14866 589 aaKnown RBP eCLIP14.37□□□□□ -0.11
COL9A2-207ENST00000482722 NFKBIAP25963 317 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 TTKP33981 857 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 YAP1P46937 504 aaKnown RBP14.37□□□□□ -0.11
COL9A2-207ENST00000482722 HK2P52789 917 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 MLLT10P55197 1068 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 POU5F1BQ06416 359 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 TRIM32Q13049 653 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 SPANXN3Q5MJ09 141 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 SYPL2Q5VXT5 272 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 IGFN1Q86VF2 1251 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 ZNF354CQ86Y25 554 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 ARL10Q8N8L6 244 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 CENPIQ92674 756 aaPredicted RBP14.37□□□□□ -0.11
COL9A2-207ENST00000482722 C11orf84Q9BUA3 381 aaPredicted RBP14.37□□□□□ -0.11
COL9A2-207ENST00000482722 GIN1Q9NXP7 522 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 CCDC167Q9P0B6 97 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 TLK1Q9UKI8 766 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 FZD10Q9ULW2 581 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 TMEM98Q9Y2Y6 226 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 SLCO1B7G3V0H7 640 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 BEST1O76090 585 aa14.37□□□□□ -0.11
COL9A2-207ENST00000482722 STAU1O95793 577 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms