RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 CXorf40AQ8TE69 158 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 TADA1Q96BN2 335 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 C1QTNF2Q9BXJ5 285 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 TDRD1Q9BXT4 1180 aaKnown RBP16.86■□□□□ 0.29
SF1-215ENST00000482693 SLC17A9Q9BYT1 436 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 C10orf88Q9H8K7 445 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 EBF2Q9HAK2 575 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 SLC6A14Q9UN76 642 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 ZFR2Q9UPR6 939 aaKnown RBP16.86■□□□□ 0.29
SF1-215ENST00000482693 ITM2BQ9Y287 266 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 PPIL1Q9Y3C6 166 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 ATXN2Q99700 1313 aaKnown RBP16.86■□□□□ 0.29
SF1-215ENST00000482693 DMDP11532 3685 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 OTOGLQ3ZCN5 2332 aa16.86■□□□□ 0.29
SF1-215ENST00000482693 IGLON5A6NGN9 336 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 PRAMEF26H0Y7S4 382 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 LIASO43766 372 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 ATP1A1P05023 1023 aaKnown RBP16.85■□□□□ 0.29
SF1-215ENST00000482693 ITIH2P19823 946 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 CD68P34810 354 aaPredicted RBP16.85■□□□□ 0.29
SF1-215ENST00000482693 MMP12P39900 470 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 GNG11P61952 73 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 CCDC6Q16204 474 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 LONRF2Q1L5Z9 754 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 SEL1L3Q68CR1 1132 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 ITPRIPL1Q6GPH6 555 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 NAPEPLDQ6IQ20 393 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 ADAT2Q7Z6V5 191 aaKnown RBP16.85■□□□□ 0.29
SF1-215ENST00000482693 ZCCHC9Q8N567 271 aaKnown RBP16.85■□□□□ 0.29
SF1-215ENST00000482693 PIH1D2Q8WWB5 315 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 SCRN2Q96FV2 425 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 SERAC1Q96JX3 654 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 FCRL5Q96RD9 977 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 RBM15Q96T37 977 aaKnown RBP eCLIP16.85■□□□□ 0.294e-9■■□□□ 11.9
SF1-215ENST00000482693 NUSAP1Q9BXS6 441 aaKnown RBP16.85■□□□□ 0.29
SF1-215ENST00000482693 ADGRE3Q9BY15 652 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 PCDH9Q9HC56 1237 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 TM9SF3Q9HD45 589 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 PARD6AQ9NPB6 346 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 HOMER3Q9NSC5 361 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 GGT7Q9UJ14 662 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 DNPEPQ9ULA0 475 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 TTC7AQ9ULT0 858 aaPredicted RBP16.85■□□□□ 0.29
SF1-215ENST00000482693 SHROOM3Q8TF72 1996 aa16.85■□□□□ 0.29
SF1-215ENST00000482693 NUMA1Q14980 2115 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 C5orf60A6NFR6 353 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 CES2O00748 559 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 MMP20O60882 483 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 OPHN1O60890 802 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 PRLP01236 227 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 CFIP05156 583 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 PDHA1P08559 390 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 NFKB1P19838 968 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 AKT2P31751 481 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 STIP1P31948 543 aaKnown RBP16.84■□□□□ 0.29
SF1-215ENST00000482693 EPHB1P54762 984 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 TEAD4Q15561 434 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 CCNG2Q16589 344 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 TRIM61Q5EBN2 209 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 ANKRD20A2Q5SQ80 823 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 ANKRD20A1Q5TYW2 823 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 ANKRD20A3Q5VUR7 823 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 USP45Q70EL2 814 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 DPPA4Q7L190 304 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 RASGEF1CQ8N431 466 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 C12orf50Q8NA57 414 aaPredicted RBP16.84■□□□□ 0.29
SF1-215ENST00000482693 SKA1Q96BD8 255 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 PPP1R2P1Q96PQ5 205 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 LENG8Q96PV6 779 aaPredicted RBP16.84■□□□□ 0.29
SF1-215ENST00000482693 MCCC1Q96RQ3 725 aaPredicted RBP16.84■□□□□ 0.29
SF1-215ENST00000482693 NAP1L3Q99457 506 aaPredicted RBP16.84■□□□□ 0.29
SF1-215ENST00000482693 WRAP53Q9BUR4 548 aaKnown RBP16.84■□□□□ 0.29
SF1-215ENST00000482693 CAPN10Q9HC96 672 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 FAM153AQ9UHL3 310 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 RSPH14Q9UHP6 348 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 SNX12Q9UMY4 172 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 CHKBQ9Y259 395 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 SDK1Q7Z5N4 2213 aa16.84■□□□□ 0.29
SF1-215ENST00000482693 PATE3B3GLJ2 98 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 SLC31A1O15431 190 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 ZNF292O60281 2723 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 GCATO75600 419 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 TM7SF2O76062 418 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 PRKCGP05129 697 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 CYP2A6P11509 494 aaPredicted RBP16.83■□□□□ 0.28
SF1-215ENST00000482693 HNRNPA2B1P22626 353 aaKnown RBP16.83■□□□□ 0.28
SF1-215ENST00000482693 GRIA4P48058 902 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 LIG3P49916 1009 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 IRX4P78413 519 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 STAT4Q14765 748 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 SF3A2Q15428 464 aaKnown RBP16.83■□□□□ 0.28
SF1-215ENST00000482693 SIX1Q15475 284 aaPredicted RBP16.83■□□□□ 0.28
SF1-215ENST00000482693 DRICH1Q6PGQ1 229 aaPredicted RBP16.83■□□□□ 0.28
SF1-215ENST00000482693 PRR23CQ6ZRP0 262 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 FAM71DQ8N9W8 422 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 SPATA22Q8NHS9 363 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 C1orf54Q8WWF1 131 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 ATG4AQ8WYN0 398 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 PIEZO1Q92508 2521 aa16.83■□□□□ 0.28
SF1-215ENST00000482693 KLK6Q92876 244 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms