RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 CBX8Q9HC52 389 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 DNAJC28Q9NX36 388 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 NLGN3Q9NZ94 848 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 LHX3Q9UBR4 397 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 IPO11Q9UI26 975 aaKnown RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 CAPN11Q9UMQ6 739 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 FAM149AA5PLN7 773 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 GOLGA6L19H0YKK7 550 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 H3BM21 787 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 TPP1O14773 563 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 SPINT1O43278 529 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 LRCH4O75427 683 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 PALMO75781 387 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 SERPING1P05155 500 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 CKMT1AP12532 417 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 NME1P15531 152 aaKnown RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 TIMP2P16035 220 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 PTMSP20962 102 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 XPAP23025 273 aaPredicted RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 DUSP3P51452 185 aaPredicted RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 THOP1P52888 689 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 ZBED6P86452 979 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 DHX9Q08211 1270 aaKnown RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 IL10RBQ08334 325 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 PDE1CQ14123 709 aaPredicted RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 TMEM52BQ4KMG9 183 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 PPP6R3Q5H9R7 873 aaPredicted RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 HGSNATQ68CP4 663 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 BRAT1Q6PJG6 821 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 PTAR1Q7Z6K3 402 aaPredicted RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 MDM1Q8TC05 714 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 CXorf40AQ8TE69 158 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 NRSN2Q9GZP1 204 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 GPATCH2LQ9NWQ4 482 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 UCKL1Q9NWZ5 548 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 CWC15Q9P013 229 aaKnown RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 MYO1AQ9UBC5 1043 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 GGT7Q9UJ14 662 aa7.83□□□□□ -1.16
CCNC-204ENST00000482541 ARID1BQ8NFD5 2236 aaPredicted RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 TDRD6O60522 2096 aaKnown RBP7.83□□□□□ -1.16
CCNC-204ENST00000482541 FRYQ5TBA9 3013 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 TSPAN11A1L157 253 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 CFAP69A5D8W1 941 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 TMEM110-MUSTN1A8MSY1 372 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 K7ESM1 405 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 MMP20O60882 483 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 GP1BAP07359 652 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 ARL4AP40617 200 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 PEX5P50542 639 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 RENBPP51606 427 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 POLR2LP62875 67 aaKnown RBP7.82□□□□□ -1.16
CCNC-204ENST00000482541 DAB2P98082 770 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 CYP4F3Q08477 520 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 TARDBPQ13148 414 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCNC-204ENST00000482541 DPYSL2Q16555 572 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 TDRD12Q587J7 1177 aaKnown RBP7.82□□□□□ -1.16
CCNC-204ENST00000482541 ZNF542PQ5EBM4 170 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 HES3Q5TGS1 186 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 SRLQ86TD4 932 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 CCDC116Q8IYX3 515 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 NIPA2Q8N8Q9 360 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 NETO2Q8NC67 525 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 CELF6Q96J87 481 aaKnown RBP7.82□□□□□ -1.16
CCNC-204ENST00000482541 APOLD1Q96LR9 279 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 TBATAQ96M53 351 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 ZNF599Q96NL3 588 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCNC-204ENST00000482541 TRIM7Q9C029 511 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 NCKIPSDQ9NZQ3 722 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 IP6K2Q9UHH9 426 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 SALL4Q9UJQ4 1053 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 ITM2BQ9Y287 266 aa7.82□□□□□ -1.16
CCNC-204ENST00000482541 LUC7L2Q9Y383 392 aaKnown RBP7.82□□□□□ -1.16
CCNC-204ENST00000482541 A0A1W2PQ67 120 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 H3BRJ5 948 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 INSIG1O15503 277 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 FFAR2O15552 330 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 AQP9O43315 295 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 BUB1BO60566 1050 aaPredicted RBP7.81□□□□□ -1.16
CCNC-204ENST00000482541 PIGNO95427 931 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 ITIH2P19823 946 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 SERPINA4P29622 427 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 EIF4A3P38919 411 aaKnown RBP7.81□□□□□ -1.16
CCNC-204ENST00000482541 BLKP51451 505 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 INSM1Q01101 510 aaPredicted RBP7.81□□□□□ -1.16
CCNC-204ENST00000482541 DPYSQ14117 519 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 RTP5Q14D33 572 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 LRRC14Q15048 493 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 CFAP58Q5T655 872 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 ZCCHC8Q6NZY4 707 aaKnown RBP7.81□□□□□ -1.16
CCNC-204ENST00000482541 ERAP2Q6P179 960 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 POLNQ7Z5Q5 900 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 MARCH9Q86YJ5 346 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 ARHGAP12Q8IWW6 846 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 SDR16C5Q8N3Y7 309 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 TP53I13Q8NBR0 393 aaPredicted RBP7.81□□□□□ -1.16
CCNC-204ENST00000482541 TSEN2Q8NCE0 465 aaKnown RBP7.81□□□□□ -1.16
CCNC-204ENST00000482541 ZNF548Q8NEK5 533 aaPredicted RBP7.81□□□□□ -1.16
CCNC-204ENST00000482541 CPLX3Q8WVH0 158 aa7.81□□□□□ -1.16
CCNC-204ENST00000482541 TEKT4Q8WW24 435 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms